Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Gm15376-201ENSMUST00000122258 783 ntBASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 AC155258.1-201ENSMUST00000219303 253 ntBASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Gm20445-201ENSMUST00000061905 565 ntBASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Gm5703-201ENSMUST00000186658 3973 ntBASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Trav8-1A0A075B641 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Retreg1-206ENSMUST00000228306 1430 ntBASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 AC124397.2-201ENSMUST00000225575 2215 ntBASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Ighv8-10-201ENSMUST00000199579 358 ntBASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 AC132104.2-201ENSMUST00000215011 266 ntBASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 AC173210.1-201ENSMUST00000222341 1131 ntBASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Gm10371-202ENSMUST00000228010 1081 ntBASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Gm18630-201ENSMUST00000222109 1397 ntBASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trav8-1A0A075B641 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms