Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.79■□□□□ 0.92
Crlf3Q9Z2L7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Crlf3Q9Z2L7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crlf3Q9Z2L7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.77■□□□□ 0.92
Crlf3Q9Z2L7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crlf3Q9Z2L7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Crlf3Q9Z2L7 Gm14523-201ENSMUST00000117260 558 ntBASIC20.77■□□□□ 0.92
Crlf3Q9Z2L7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.77■□□□□ 0.92
Crlf3Q9Z2L7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crlf3Q9Z2L7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crlf3Q9Z2L7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Crlf3Q9Z2L7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Crlf3Q9Z2L7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Crlf3Q9Z2L7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Crlf3Q9Z2L7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Crlf3Q9Z2L7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Crlf3Q9Z2L7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.76■□□□□ 0.91
Crlf3Q9Z2L7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Crlf3Q9Z2L7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Crlf3Q9Z2L7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Crlf3Q9Z2L7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Crlf3Q9Z2L7 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.74■□□□□ 0.91
Crlf3Q9Z2L7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crlf3Q9Z2L7 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.74■□□□□ 0.91
Crlf3Q9Z2L7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crlf3Q9Z2L7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crlf3Q9Z2L7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.74■□□□□ 0.91
Crlf3Q9Z2L7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.74■□□□□ 0.91
Crlf3Q9Z2L7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crlf3Q9Z2L7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crlf3Q9Z2L7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Crlf3Q9Z2L7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf3Q9Z2L7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf3Q9Z2L7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf3Q9Z2L7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf3Q9Z2L7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf3Q9Z2L7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Crlf3Q9Z2L7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf3Q9Z2L7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Crlf3Q9Z2L7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf3Q9Z2L7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Crlf3Q9Z2L7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Crlf3Q9Z2L7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Crlf3Q9Z2L7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Crlf3Q9Z2L7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Crlf3Q9Z2L7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Crlf3Q9Z2L7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Crlf3Q9Z2L7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.7■□□□□ 0.9
Crlf3Q9Z2L7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.7■□□□□ 0.9
Crlf3Q9Z2L7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Crlf3Q9Z2L7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crlf3Q9Z2L7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crlf3Q9Z2L7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crlf3Q9Z2L7 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.69■□□□□ 0.9
Crlf3Q9Z2L7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crlf3Q9Z2L7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crlf3Q9Z2L7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crlf3Q9Z2L7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Crlf3Q9Z2L7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Crlf3Q9Z2L7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms