Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Gm15820-201ENSMUST00000201566 728 ntBASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ClcnkaQ9WUB7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ClcnkaQ9WUB7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ClcnkaQ9WUB7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
ClcnkaQ9WUB7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ClcnkaQ9WUB7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.93■□□□□ 0.62
ClcnkaQ9WUB7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
ClcnkaQ9WUB7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ClcnkaQ9WUB7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ClcnkaQ9WUB7 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.93■□□□□ 0.62
ClcnkaQ9WUB7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ClcnkaQ9WUB7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClcnkaQ9WUB7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClcnkaQ9WUB7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ClcnkaQ9WUB7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClcnkaQ9WUB7 Gm15546-201ENSMUST00000122095 826 ntBASIC18.92■□□□□ 0.62
ClcnkaQ9WUB7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ClcnkaQ9WUB7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ClcnkaQ9WUB7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ClcnkaQ9WUB7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ClcnkaQ9WUB7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClcnkaQ9WUB7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ClcnkaQ9WUB7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ClcnkaQ9WUB7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.91■□□□□ 0.62
ClcnkaQ9WUB7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.91■□□□□ 0.62
ClcnkaQ9WUB7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ClcnkaQ9WUB7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ClcnkaQ9WUB7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ClcnkaQ9WUB7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.9■□□□□ 0.62
ClcnkaQ9WUB7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClcnkaQ9WUB7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClcnkaQ9WUB7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.9■□□□□ 0.62
ClcnkaQ9WUB7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.9■□□□□ 0.62
ClcnkaQ9WUB7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ClcnkaQ9WUB7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.9■□□□□ 0.62
ClcnkaQ9WUB7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ClcnkaQ9WUB7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ClcnkaQ9WUB7 Gm10399-202ENSMUST00000202768 748 ntBASIC18.89■□□□□ 0.61
ClcnkaQ9WUB7 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.89■□□□□ 0.61
ClcnkaQ9WUB7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.89■□□□□ 0.61
ClcnkaQ9WUB7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ClcnkaQ9WUB7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ClcnkaQ9WUB7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ClcnkaQ9WUB7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ClcnkaQ9WUB7 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.87■□□□□ 0.61
ClcnkaQ9WUB7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ClcnkaQ9WUB7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ClcnkaQ9WUB7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ClcnkaQ9WUB7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.86■□□□□ 0.61
ClcnkaQ9WUB7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClcnkaQ9WUB7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClcnkaQ9WUB7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClcnkaQ9WUB7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClcnkaQ9WUB7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ClcnkaQ9WUB7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ClcnkaQ9WUB7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms