Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn8aQ9WTU3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Scn8aQ9WTU3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn8aQ9WTU3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn8aQ9WTU3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Scn8aQ9WTU3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.07■□□□□ 0.96
Scn8aQ9WTU3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn8aQ9WTU3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn8aQ9WTU3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn8aQ9WTU3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn8aQ9WTU3 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.06■□□□□ 0.96
Scn8aQ9WTU3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn8aQ9WTU3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.06■□□□□ 0.96
Scn8aQ9WTU3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn8aQ9WTU3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn8aQ9WTU3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.05■□□□□ 0.96
Scn8aQ9WTU3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn8aQ9WTU3 Gm9870-201ENSMUST00000063874 645 ntBASIC21.04■□□□□ 0.96
Scn8aQ9WTU3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn8aQ9WTU3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Scn8aQ9WTU3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn8aQ9WTU3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn8aQ9WTU3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 Gm43530-201ENSMUST00000195920 274 ntBASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn8aQ9WTU3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn8aQ9WTU3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
Scn8aQ9WTU3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Scn8aQ9WTU3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.02■□□□□ 0.96
Scn8aQ9WTU3 Gm27454-201ENSMUST00000185090 204 ntBASIC21.02■□□□□ 0.96
Scn8aQ9WTU3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn8aQ9WTU3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn8aQ9WTU3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Scn8aQ9WTU3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Scn8aQ9WTU3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn8aQ9WTU3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn8aQ9WTU3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Scn8aQ9WTU3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Scn8aQ9WTU3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn8aQ9WTU3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn8aQ9WTU3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.99■□□□□ 0.95
Scn8aQ9WTU3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn8aQ9WTU3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn8aQ9WTU3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn8aQ9WTU3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn8aQ9WTU3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn8aQ9WTU3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn8aQ9WTU3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn8aQ9WTU3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn8aQ9WTU3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Scn8aQ9WTU3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn8aQ9WTU3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Scn8aQ9WTU3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Scn8aQ9WTU3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn8aQ9WTU3 Gm15039-201ENSMUST00000118914 875 ntBASIC20.97■□□□□ 0.95
Scn8aQ9WTU3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn8aQ9WTU3 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms