Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Htra1Q9R118 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.93■□□□□ 0.62
Htra1Q9R118 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Htra1Q9R118 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Htra1Q9R118 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Htra1Q9R118 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Htra1Q9R118 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Htra1Q9R118 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Htra1Q9R118 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Htra1Q9R118 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Htra1Q9R118 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Htra1Q9R118 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Htra1Q9R118 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Htra1Q9R118 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Htra1Q9R118 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Htra1Q9R118 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.91■□□□□ 0.62
Htra1Q9R118 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Htra1Q9R118 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Htra1Q9R118 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Htra1Q9R118 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.91■□□□□ 0.62
Htra1Q9R118 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Htra1Q9R118 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.91■□□□□ 0.62
Htra1Q9R118 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Htra1Q9R118 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Htra1Q9R118 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Htra1Q9R118 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Htra1Q9R118 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.9■□□□□ 0.62
Htra1Q9R118 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Htra1Q9R118 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Htra1Q9R118 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Htra1Q9R118 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.9■□□□□ 0.62
Htra1Q9R118 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Htra1Q9R118 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Htra1Q9R118 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Htra1Q9R118 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Htra1Q9R118 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Htra1Q9R118 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Htra1Q9R118 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Htra1Q9R118 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Htra1Q9R118 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Htra1Q9R118 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Htra1Q9R118 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Htra1Q9R118 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Htra1Q9R118 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Htra1Q9R118 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Htra1Q9R118 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Htra1Q9R118 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Htra1Q9R118 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Htra1Q9R118 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Htra1Q9R118 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Htra1Q9R118 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Htra1Q9R118 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Htra1Q9R118 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Htra1Q9R118 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Htra1Q9R118 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Htra1Q9R118 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Htra1Q9R118 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Htra1Q9R118 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Htra1Q9R118 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.88■□□□□ 0.61
Htra1Q9R118 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Htra1Q9R118 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Htra1Q9R118 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Htra1Q9R118 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Htra1Q9R118 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Htra1Q9R118 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Htra1Q9R118 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Htra1Q9R118 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Htra1Q9R118 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Htra1Q9R118 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Htra1Q9R118 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Htra1Q9R118 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Htra1Q9R118 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.86■□□□□ 0.61
Htra1Q9R118 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Htra1Q9R118 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Htra1Q9R118 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Htra1Q9R118 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Htra1Q9R118 Gm10420-201ENSMUST00000121713 882 ntBASIC18.85■□□□□ 0.61
Htra1Q9R118 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.85■□□□□ 0.61
Htra1Q9R118 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Htra1Q9R118 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Htra1Q9R118 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Htra1Q9R118 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Htra1Q9R118 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Htra1Q9R118 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Htra1Q9R118 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Htra1Q9R118 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Htra1Q9R118 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Htra1Q9R118 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.84■□□□□ 0.61
Htra1Q9R118 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 1499.7 ms