Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nubp1Q9R060 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nubp1Q9R060 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nubp1Q9R060 Gm10493-201ENSMUST00000097270 612 ntBASIC17.97■□□□□ 0.47
Nubp1Q9R060 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nubp1Q9R060 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nubp1Q9R060 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nubp1Q9R060 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nubp1Q9R060 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nubp1Q9R060 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.96■□□□□ 0.47
Nubp1Q9R060 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.96■□□□□ 0.47
Nubp1Q9R060 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nubp1Q9R060 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nubp1Q9R060 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nubp1Q9R060 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nubp1Q9R060 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nubp1Q9R060 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.95■□□□□ 0.46
Nubp1Q9R060 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.95■□□□□ 0.46
Nubp1Q9R060 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.95■□□□□ 0.46
Nubp1Q9R060 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nubp1Q9R060 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nubp1Q9R060 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Nubp1Q9R060 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.94■□□□□ 0.46
Nubp1Q9R060 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nubp1Q9R060 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nubp1Q9R060 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nubp1Q9R060 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nubp1Q9R060 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Nubp1Q9R060 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.94■□□□□ 0.46
Nubp1Q9R060 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Nubp1Q9R060 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.94■□□□□ 0.46
Nubp1Q9R060 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nubp1Q9R060 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nubp1Q9R060 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nubp1Q9R060 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nubp1Q9R060 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.92■□□□□ 0.46
Nubp1Q9R060 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.92■□□□□ 0.46
Nubp1Q9R060 Gm43173-201ENSMUST00000202246 593 ntBASIC17.92■□□□□ 0.46
Nubp1Q9R060 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.92■□□□□ 0.46
Nubp1Q9R060 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Nubp1Q9R060 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nubp1Q9R060 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nubp1Q9R060 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Nubp1Q9R060 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nubp1Q9R060 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nubp1Q9R060 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Gm42569-201ENSMUST00000200539 472 ntBASIC17.91■□□□□ 0.46
Nubp1Q9R060 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nubp1Q9R060 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nubp1Q9R060 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nubp1Q9R060 Gm10849-201ENSMUST00000100397 618 ntBASIC17.89■□□□□ 0.45
Nubp1Q9R060 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms