Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.39■□□□□ 0.85
Tdp2Q9JJX7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tdp2Q9JJX7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp2Q9JJX7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp2Q9JJX7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp2Q9JJX7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Tdp2Q9JJX7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp2Q9JJX7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp2Q9JJX7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp2Q9JJX7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tdp2Q9JJX7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp2Q9JJX7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp2Q9JJX7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tdp2Q9JJX7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp2Q9JJX7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp2Q9JJX7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp2Q9JJX7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp2Q9JJX7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp2Q9JJX7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp2Q9JJX7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tdp2Q9JJX7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.36■□□□□ 0.85
Tdp2Q9JJX7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Tdp2Q9JJX7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tdp2Q9JJX7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Tdp2Q9JJX7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp2Q9JJX7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp2Q9JJX7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp2Q9JJX7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp2Q9JJX7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp2Q9JJX7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Tdp2Q9JJX7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp2Q9JJX7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tdp2Q9JJX7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Tdp2Q9JJX7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tdp2Q9JJX7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp2Q9JJX7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp2Q9JJX7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp2Q9JJX7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tdp2Q9JJX7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.33■□□□□ 0.84
Tdp2Q9JJX7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tdp2Q9JJX7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Tdp2Q9JJX7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tdp2Q9JJX7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tdp2Q9JJX7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tdp2Q9JJX7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tdp2Q9JJX7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp2Q9JJX7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp2Q9JJX7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.31■□□□□ 0.84
Tdp2Q9JJX7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.31■□□□□ 0.84
Tdp2Q9JJX7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp2Q9JJX7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tdp2Q9JJX7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.31■□□□□ 0.84
Tdp2Q9JJX7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp2Q9JJX7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp2Q9JJX7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tdp2Q9JJX7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.3■□□□□ 0.84
Tdp2Q9JJX7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tdp2Q9JJX7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tdp2Q9JJX7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tdp2Q9JJX7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tdp2Q9JJX7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.28■□□□□ 0.84
Tdp2Q9JJX7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Tdp2Q9JJX7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Tdp2Q9JJX7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tdp2Q9JJX7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms