Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3h8Q9JJ48 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3h8Q9JJ48 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zc3h8Q9JJ48 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.18■□□□□ 0.66
Zc3h8Q9JJ48 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zc3h8Q9JJ48 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Zc3h8Q9JJ48 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Zc3h8Q9JJ48 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zc3h8Q9JJ48 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Zc3h8Q9JJ48 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zc3h8Q9JJ48 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zc3h8Q9JJ48 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Zc3h8Q9JJ48 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zc3h8Q9JJ48 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zc3h8Q9JJ48 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zc3h8Q9JJ48 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Zc3h8Q9JJ48 Gm9847-201ENSMUST00000052528 599 ntBASIC19.17■□□□□ 0.66
Zc3h8Q9JJ48 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zc3h8Q9JJ48 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zc3h8Q9JJ48 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.16■□□□□ 0.66
Zc3h8Q9JJ48 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Gm9870-201ENSMUST00000063874 645 ntBASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zc3h8Q9JJ48 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 Gm13241-201ENSMUST00000094493 780 ntBASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
Zc3h8Q9JJ48 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Gm7143-201ENSMUST00000222811 859 ntBASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Zc3h8Q9JJ48 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.12■□□□□ 0.65
Zc3h8Q9JJ48 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zc3h8Q9JJ48 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.12■□□□□ 0.65
Zc3h8Q9JJ48 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.12■□□□□ 0.65
Zc3h8Q9JJ48 Golgb1-201ENSMUST00000023534 498 ntBASIC19.12■□□□□ 0.65
Zc3h8Q9JJ48 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Zc3h8Q9JJ48 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Zc3h8Q9JJ48 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Zc3h8Q9JJ48 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zc3h8Q9JJ48 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.1■□□□□ 0.65
Zc3h8Q9JJ48 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zc3h8Q9JJ48 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zc3h8Q9JJ48 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Zc3h8Q9JJ48 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zc3h8Q9JJ48 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zc3h8Q9JJ48 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zc3h8Q9JJ48 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms