Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rhox4bQ9JI43 Mir3960-201ENSMUST00000198213 73 ntBASIC16.53■□□□□ 0.24
Rhox4bQ9JI43 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.53■□□□□ 0.24
Rhox4bQ9JI43 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rhox4bQ9JI43 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rhox4bQ9JI43 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.53■□□□□ 0.24
Rhox4bQ9JI43 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rhox4bQ9JI43 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.52■□□□□ 0.24
Rhox4bQ9JI43 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rhox4bQ9JI43 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rhox4bQ9JI43 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Rhox4bQ9JI43 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
Rhox4bQ9JI43 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rhox4bQ9JI43 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rhox4bQ9JI43 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rhox4bQ9JI43 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.52■□□□□ 0.23
Rhox4bQ9JI43 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rhox4bQ9JI43 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Rhox4bQ9JI43 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Rhox4bQ9JI43 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.48■□□□□ 0.23
Rhox4bQ9JI43 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rhox4bQ9JI43 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Rhox4bQ9JI43 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rhox4bQ9JI43 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rhox4bQ9JI43 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rhox4bQ9JI43 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rhox4bQ9JI43 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rhox4bQ9JI43 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rhox4bQ9JI43 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rhox4bQ9JI43 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rhox4bQ9JI43 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rhox4bQ9JI43 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rhox4bQ9JI43 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rhox4bQ9JI43 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rhox4bQ9JI43 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rhox4bQ9JI43 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rhox4bQ9JI43 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rhox4bQ9JI43 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.46■□□□□ 0.23
Rhox4bQ9JI43 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rhox4bQ9JI43 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rhox4bQ9JI43 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Rhox4bQ9JI43 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rhox4bQ9JI43 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rhox4bQ9JI43 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4bQ9JI43 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4bQ9JI43 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4bQ9JI43 Gm6821-201ENSMUST00000107540 542 ntBASIC16.45■□□□□ 0.22
Rhox4bQ9JI43 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rhox4bQ9JI43 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rhox4bQ9JI43 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.44■□□□□ 0.22
Rhox4bQ9JI43 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rhox4bQ9JI43 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rhox4bQ9JI43 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms