Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Nif3l1Q9EQ80 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nif3l1Q9EQ80 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.55■□□□□ 0.88
Nif3l1Q9EQ80 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.55■□□□□ 0.88
Nif3l1Q9EQ80 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nif3l1Q9EQ80 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nif3l1Q9EQ80 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nif3l1Q9EQ80 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.54■□□□□ 0.88
Nif3l1Q9EQ80 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.54■□□□□ 0.88
Nif3l1Q9EQ80 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nif3l1Q9EQ80 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Nif3l1Q9EQ80 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nif3l1Q9EQ80 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nif3l1Q9EQ80 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nif3l1Q9EQ80 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nif3l1Q9EQ80 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Nif3l1Q9EQ80 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nif3l1Q9EQ80 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Nif3l1Q9EQ80 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nif3l1Q9EQ80 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nif3l1Q9EQ80 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.51■□□□□ 0.87
Nif3l1Q9EQ80 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Nif3l1Q9EQ80 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nif3l1Q9EQ80 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.51■□□□□ 0.87
Nif3l1Q9EQ80 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.51■□□□□ 0.87
Nif3l1Q9EQ80 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nif3l1Q9EQ80 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.5■□□□□ 0.87
Nif3l1Q9EQ80 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nif3l1Q9EQ80 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.5■□□□□ 0.87
Nif3l1Q9EQ80 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nif3l1Q9EQ80 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nif3l1Q9EQ80 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Etf1-202ENSMUST00000180351 108 ntBASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Gm9959-201ENSMUST00000068277 390 ntBASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nif3l1Q9EQ80 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Gm7417-201ENSMUST00000192950 473 ntBASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.48■□□□□ 0.87
Nif3l1Q9EQ80 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nif3l1Q9EQ80 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Nif3l1Q9EQ80 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nif3l1Q9EQ80 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nif3l1Q9EQ80 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Nif3l1Q9EQ80 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nif3l1Q9EQ80 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.46■□□□□ 0.87
Nif3l1Q9EQ80 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nif3l1Q9EQ80 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nif3l1Q9EQ80 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nif3l1Q9EQ80 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nif3l1Q9EQ80 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nif3l1Q9EQ80 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.45■□□□□ 0.86
Nif3l1Q9EQ80 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nif3l1Q9EQ80 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nif3l1Q9EQ80 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.45■□□□□ 0.86
Nif3l1Q9EQ80 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nif3l1Q9EQ80 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nif3l1Q9EQ80 Rps24-207ENSMUST00000224568 714 ntBASIC20.44■□□□□ 0.86
Nif3l1Q9EQ80 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
Nif3l1Q9EQ80 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nif3l1Q9EQ80 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nif3l1Q9EQ80 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nif3l1Q9EQ80 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms