Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr3Q9DCF9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr3Q9DCF9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr3Q9DCF9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr3Q9DCF9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ssr3Q9DCF9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.43■□□□□ 0.54
Ssr3Q9DCF9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr3Q9DCF9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.42■□□□□ 0.54
Ssr3Q9DCF9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr3Q9DCF9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ssr3Q9DCF9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ssr3Q9DCF9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ssr3Q9DCF9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr3Q9DCF9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ssr3Q9DCF9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ssr3Q9DCF9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ssr3Q9DCF9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ssr3Q9DCF9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr3Q9DCF9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ssr3Q9DCF9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ssr3Q9DCF9 Gm45364-201ENSMUST00000210883 159 ntBASIC18.38■□□□□ 0.53
Ssr3Q9DCF9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr3Q9DCF9 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.38■□□□□ 0.53
Ssr3Q9DCF9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr3Q9DCF9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ssr3Q9DCF9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr3Q9DCF9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr3Q9DCF9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr3Q9DCF9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ssr3Q9DCF9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr3Q9DCF9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.36■□□□□ 0.53
Ssr3Q9DCF9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr3Q9DCF9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ssr3Q9DCF9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ssr3Q9DCF9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ssr3Q9DCF9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr3Q9DCF9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr3Q9DCF9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr3Q9DCF9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr3Q9DCF9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.35■□□□□ 0.53
Ssr3Q9DCF9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr3Q9DCF9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr3Q9DCF9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr3Q9DCF9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ssr3Q9DCF9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ssr3Q9DCF9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ssr3Q9DCF9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Ssr3Q9DCF9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.33■□□□□ 0.52
Ssr3Q9DCF9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ssr3Q9DCF9 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.33■□□□□ 0.52
Ssr3Q9DCF9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssr3Q9DCF9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ssr3Q9DCF9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ssr3Q9DCF9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms