Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Gm13238-201ENSMUST00000117655 780 ntBASIC18.48■□□□□ 0.55
Rtl8cQ9D6I0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl8cQ9D6I0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl8cQ9D6I0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rtl8cQ9D6I0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
Rtl8cQ9D6I0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl8cQ9D6I0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl8cQ9D6I0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl8cQ9D6I0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.46■□□□□ 0.55
Rtl8cQ9D6I0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rtl8cQ9D6I0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rtl8cQ9D6I0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rtl8cQ9D6I0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.46■□□□□ 0.55
Rtl8cQ9D6I0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Rtl8cQ9D6I0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl8cQ9D6I0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.45■□□□□ 0.54
Rtl8cQ9D6I0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rtl8cQ9D6I0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rtl8cQ9D6I0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Rtl8cQ9D6I0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rtl8cQ9D6I0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.43■□□□□ 0.54
Rtl8cQ9D6I0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.43■□□□□ 0.54
Rtl8cQ9D6I0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl8cQ9D6I0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl8cQ9D6I0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtl8cQ9D6I0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.43■□□□□ 0.54
Rtl8cQ9D6I0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Rtl8cQ9D6I0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl8cQ9D6I0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl8cQ9D6I0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.42■□□□□ 0.54
Rtl8cQ9D6I0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.42■□□□□ 0.54
Rtl8cQ9D6I0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rtl8cQ9D6I0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl8cQ9D6I0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rtl8cQ9D6I0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rtl8cQ9D6I0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtl8cQ9D6I0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtl8cQ9D6I0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.39■□□□□ 0.54
Rtl8cQ9D6I0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtl8cQ9D6I0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtl8cQ9D6I0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtl8cQ9D6I0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtl8cQ9D6I0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rtl8cQ9D6I0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms