Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.27■□□□□ 0.35
ShpkQ9D5J6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ShpkQ9D5J6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.26■□□□□ 0.35
ShpkQ9D5J6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShpkQ9D5J6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShpkQ9D5J6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShpkQ9D5J6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShpkQ9D5J6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShpkQ9D5J6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShpkQ9D5J6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
ShpkQ9D5J6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
ShpkQ9D5J6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ShpkQ9D5J6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Nkain2-201ENSMUST00000092602 558 ntBASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ShpkQ9D5J6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShpkQ9D5J6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ShpkQ9D5J6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.24■□□□□ 0.35
ShpkQ9D5J6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShpkQ9D5J6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ShpkQ9D5J6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ShpkQ9D5J6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.24■□□□□ 0.35
ShpkQ9D5J6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Gm9812-201ENSMUST00000061934 968 ntBASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ShpkQ9D5J6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ShpkQ9D5J6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShpkQ9D5J6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ShpkQ9D5J6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShpkQ9D5J6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ShpkQ9D5J6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ShpkQ9D5J6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
ShpkQ9D5J6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ShpkQ9D5J6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.21■□□□□ 0.34
ShpkQ9D5J6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ShpkQ9D5J6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShpkQ9D5J6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShpkQ9D5J6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShpkQ9D5J6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShpkQ9D5J6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShpkQ9D5J6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ShpkQ9D5J6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShpkQ9D5J6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.2■□□□□ 0.34
ShpkQ9D5J6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShpkQ9D5J6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ShpkQ9D5J6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ShpkQ9D5J6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShpkQ9D5J6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShpkQ9D5J6 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.19■□□□□ 0.34
ShpkQ9D5J6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShpkQ9D5J6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ShpkQ9D5J6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShpkQ9D5J6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
ShpkQ9D5J6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShpkQ9D5J6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.18■□□□□ 0.34
ShpkQ9D5J6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms