Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cthrc1Q9D1D6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.29■□□□□ 0.68
Cthrc1Q9D1D6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cthrc1Q9D1D6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Cthrc1Q9D1D6 Gm15039-201ENSMUST00000118914 875 ntBASIC19.28■□□□□ 0.68
Cthrc1Q9D1D6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cthrc1Q9D1D6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cthrc1Q9D1D6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cthrc1Q9D1D6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cthrc1Q9D1D6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cthrc1Q9D1D6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cthrc1Q9D1D6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cthrc1Q9D1D6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.27■□□□□ 0.68
Cthrc1Q9D1D6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cthrc1Q9D1D6 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.27■□□□□ 0.67
Cthrc1Q9D1D6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cthrc1Q9D1D6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cthrc1Q9D1D6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cthrc1Q9D1D6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cthrc1Q9D1D6 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.25■□□□□ 0.67
Cthrc1Q9D1D6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.25■□□□□ 0.67
Cthrc1Q9D1D6 Gm7417-201ENSMUST00000192950 473 ntBASIC19.25■□□□□ 0.67
Cthrc1Q9D1D6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.25■□□□□ 0.67
Cthrc1Q9D1D6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Cthrc1Q9D1D6 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.25■□□□□ 0.67
Cthrc1Q9D1D6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.24■□□□□ 0.67
Cthrc1Q9D1D6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cthrc1Q9D1D6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cthrc1Q9D1D6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cthrc1Q9D1D6 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cthrc1Q9D1D6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cthrc1Q9D1D6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cthrc1Q9D1D6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.22■□□□□ 0.67
Cthrc1Q9D1D6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.22■□□□□ 0.67
Cthrc1Q9D1D6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.22■□□□□ 0.67
Cthrc1Q9D1D6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cthrc1Q9D1D6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.22■□□□□ 0.67
Cthrc1Q9D1D6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Cthrc1Q9D1D6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cthrc1Q9D1D6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cthrc1Q9D1D6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cthrc1Q9D1D6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.21■□□□□ 0.67
Cthrc1Q9D1D6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.21■□□□□ 0.67
Cthrc1Q9D1D6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cthrc1Q9D1D6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cthrc1Q9D1D6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cthrc1Q9D1D6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cthrc1Q9D1D6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cthrc1Q9D1D6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cthrc1Q9D1D6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cthrc1Q9D1D6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.19■□□□□ 0.66
Cthrc1Q9D1D6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cthrc1Q9D1D6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cthrc1Q9D1D6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.19■□□□□ 0.66
Cthrc1Q9D1D6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cthrc1Q9D1D6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.19■□□□□ 0.66
Cthrc1Q9D1D6 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.19■□□□□ 0.66
Cthrc1Q9D1D6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cthrc1Q9D1D6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cthrc1Q9D1D6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.18■□□□□ 0.66
Cthrc1Q9D1D6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cthrc1Q9D1D6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Cthrc1Q9D1D6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cthrc1Q9D1D6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.18■□□□□ 0.66
Cthrc1Q9D1D6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cthrc1Q9D1D6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cthrc1Q9D1D6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cthrc1Q9D1D6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.18■□□□□ 0.66
Cthrc1Q9D1D6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cthrc1Q9D1D6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cthrc1Q9D1D6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cthrc1Q9D1D6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cthrc1Q9D1D6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cthrc1Q9D1D6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cthrc1Q9D1D6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cthrc1Q9D1D6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cthrc1Q9D1D6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms