Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx47Q9CWX9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx47Q9CWX9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx47Q9CWX9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx47Q9CWX9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx47Q9CWX9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx47Q9CWX9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.29■■□□□ 1
Ddx47Q9CWX9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx47Q9CWX9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx47Q9CWX9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx47Q9CWX9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx47Q9CWX9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx47Q9CWX9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx47Q9CWX9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx47Q9CWX9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.27■■□□□ 1
Ddx47Q9CWX9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx47Q9CWX9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ddx47Q9CWX9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ddx47Q9CWX9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx47Q9CWX9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ddx47Q9CWX9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx47Q9CWX9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.26■□□□□ 0.99
Ddx47Q9CWX9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx47Q9CWX9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.26■□□□□ 0.99
Ddx47Q9CWX9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx47Q9CWX9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx47Q9CWX9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx47Q9CWX9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ddx47Q9CWX9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx47Q9CWX9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx47Q9CWX9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.24■□□□□ 0.99
Ddx47Q9CWX9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx47Q9CWX9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ddx47Q9CWX9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Ddx47Q9CWX9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx47Q9CWX9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx47Q9CWX9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ddx47Q9CWX9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx47Q9CWX9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx47Q9CWX9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx47Q9CWX9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx47Q9CWX9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx47Q9CWX9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ddx47Q9CWX9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Ddx47Q9CWX9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.21■□□□□ 0.99
Ddx47Q9CWX9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx47Q9CWX9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx47Q9CWX9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx47Q9CWX9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx47Q9CWX9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx47Q9CWX9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx47Q9CWX9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ddx47Q9CWX9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ddx47Q9CWX9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.2■□□□□ 0.99
Ddx47Q9CWX9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.2■□□□□ 0.99
Ddx47Q9CWX9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx47Q9CWX9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx47Q9CWX9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx47Q9CWX9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ddx47Q9CWX9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.2■□□□□ 0.98
Ddx47Q9CWX9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ddx47Q9CWX9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx47Q9CWX9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx47Q9CWX9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.19■□□□□ 0.98
Ddx47Q9CWX9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.19■□□□□ 0.98
Ddx47Q9CWX9 Gm7432-201ENSMUST00000210343 879 ntBASIC21.19■□□□□ 0.98
Ddx47Q9CWX9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ddx47Q9CWX9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx47Q9CWX9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx47Q9CWX9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx47Q9CWX9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.18■□□□□ 0.98
Ddx47Q9CWX9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ddx47Q9CWX9 Gm11599-201ENSMUST00000118720 878 ntBASIC21.18■□□□□ 0.98
Ddx47Q9CWX9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ddx47Q9CWX9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ddx47Q9CWX9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms