Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf135Q9CWS1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.45■■□□□ 1.02
Rnf135Q9CWS1 Gm45102-201ENSMUST00000207427 857 ntBASIC21.45■■□□□ 1.02
Rnf135Q9CWS1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf135Q9CWS1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rnf135Q9CWS1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rnf135Q9CWS1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnf135Q9CWS1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Gm14117-201ENSMUST00000122417 843 ntBASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnf135Q9CWS1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf135Q9CWS1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf135Q9CWS1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnf135Q9CWS1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rnf135Q9CWS1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
Rnf135Q9CWS1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Rnf135Q9CWS1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Rnf135Q9CWS1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf135Q9CWS1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf135Q9CWS1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
Rnf135Q9CWS1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Rnf135Q9CWS1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf135Q9CWS1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf135Q9CWS1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf135Q9CWS1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf135Q9CWS1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf135Q9CWS1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Rnf135Q9CWS1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rnf135Q9CWS1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Rnf135Q9CWS1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 148.8 ms