Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61bQ9CQS8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sec61bQ9CQS8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sec61bQ9CQS8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sec61bQ9CQS8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sec61bQ9CQS8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sec61bQ9CQS8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Sec61bQ9CQS8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61bQ9CQS8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC11.02□□□□□ -0.65
Sec61bQ9CQS8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC11.02□□□□□ -0.65
Sec61bQ9CQS8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Sec61bQ9CQS8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61bQ9CQS8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61bQ9CQS8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61bQ9CQS8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC11.02□□□□□ -0.65
Sec61bQ9CQS8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sec61bQ9CQS8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sec61bQ9CQS8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Gm5576-201ENSMUST00000075809 1236 ntBASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Sec61bQ9CQS8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Gm43137-201ENSMUST00000198052 594 ntBASIC11□□□□□ -0.65
Sec61bQ9CQS8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Gm7143-201ENSMUST00000222811 859 ntBASIC11□□□□□ -0.65
Sec61bQ9CQS8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61bQ9CQS8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sec61bQ9CQS8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Sec61bQ9CQS8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Sec61bQ9CQS8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms