Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl54Q9CPW3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl54Q9CPW3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl54Q9CPW3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl54Q9CPW3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mrpl54Q9CPW3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mrpl54Q9CPW3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mrpl54Q9CPW3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl54Q9CPW3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl54Q9CPW3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Mrpl54Q9CPW3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl54Q9CPW3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl54Q9CPW3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Mrpl54Q9CPW3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.39■□□□□ 0.53
Mrpl54Q9CPW3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl54Q9CPW3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.39■□□□□ 0.53
Mrpl54Q9CPW3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mrpl54Q9CPW3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Gm4799-201ENSMUST00000095396 657 ntBASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mrpl54Q9CPW3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Mrpl54Q9CPW3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl54Q9CPW3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.37■□□□□ 0.53
Mrpl54Q9CPW3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl54Q9CPW3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl54Q9CPW3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mrpl54Q9CPW3 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.36■□□□□ 0.53
Mrpl54Q9CPW3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.36■□□□□ 0.53
Mrpl54Q9CPW3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl54Q9CPW3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl54Q9CPW3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.36■□□□□ 0.53
Mrpl54Q9CPW3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl54Q9CPW3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl54Q9CPW3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mrpl54Q9CPW3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl54Q9CPW3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Mrpl54Q9CPW3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl54Q9CPW3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl54Q9CPW3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl54Q9CPW3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.35■□□□□ 0.53
Mrpl54Q9CPW3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.35■□□□□ 0.53
Mrpl54Q9CPW3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mrpl54Q9CPW3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl54Q9CPW3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Mrpl54Q9CPW3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl54Q9CPW3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl54Q9CPW3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl54Q9CPW3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl54Q9CPW3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mrpl54Q9CPW3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mrpl54Q9CPW3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Mrpl54Q9CPW3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mrpl54Q9CPW3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Mrpl54Q9CPW3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.33■□□□□ 0.53
Mrpl54Q9CPW3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl54Q9CPW3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl54Q9CPW3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl54Q9CPW3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl54Q9CPW3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl54Q9CPW3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl54Q9CPW3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Mrpl54Q9CPW3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl54Q9CPW3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl54Q9CPW3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.31■□□□□ 0.52
Mrpl54Q9CPW3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl54Q9CPW3 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.31■□□□□ 0.52
Mrpl54Q9CPW3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl54Q9CPW3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl54Q9CPW3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl54Q9CPW3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.29■□□□□ 0.52
Mrpl54Q9CPW3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms