Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ska1Q9CPV1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ska1Q9CPV1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ska1Q9CPV1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ska1Q9CPV1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.38■□□□□ 0.69
Ska1Q9CPV1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ska1Q9CPV1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ska1Q9CPV1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ska1Q9CPV1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ska1Q9CPV1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.38■□□□□ 0.69
Ska1Q9CPV1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ska1Q9CPV1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Ska1Q9CPV1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ska1Q9CPV1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ska1Q9CPV1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Iqck-206ENSMUST00000208658 2891 ntBASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Gm10420-201ENSMUST00000121713 882 ntBASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ska1Q9CPV1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ska1Q9CPV1 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.35■□□□□ 0.69
Ska1Q9CPV1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ska1Q9CPV1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ska1Q9CPV1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ska1Q9CPV1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ska1Q9CPV1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ska1Q9CPV1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ska1Q9CPV1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ska1Q9CPV1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ska1Q9CPV1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ska1Q9CPV1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ska1Q9CPV1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ska1Q9CPV1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ska1Q9CPV1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ska1Q9CPV1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ska1Q9CPV1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.33■□□□□ 0.68
Ska1Q9CPV1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ska1Q9CPV1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ska1Q9CPV1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ska1Q9CPV1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ska1Q9CPV1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms