Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdh15Q99PJ1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdh15Q99PJ1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pcdh15Q99PJ1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC24.18■■□□□ 1.46
Pcdh15Q99PJ1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdh15Q99PJ1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC24.18■■□□□ 1.46
Pcdh15Q99PJ1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdh15Q99PJ1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcdh15Q99PJ1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdh15Q99PJ1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC24.17■■□□□ 1.46
Pcdh15Q99PJ1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Pcdh15Q99PJ1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdh15Q99PJ1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pcdh15Q99PJ1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pcdh15Q99PJ1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.16■■□□□ 1.46
Pcdh15Q99PJ1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC24.16■■□□□ 1.46
Pcdh15Q99PJ1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdh15Q99PJ1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Pcdh15Q99PJ1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Pcdh15Q99PJ1 Smad6-203ENSMUST00000179458 273 ntBASIC24.15■■□□□ 1.46
Pcdh15Q99PJ1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pcdh15Q99PJ1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdh15Q99PJ1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdh15Q99PJ1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC24.14■■□□□ 1.45
Pcdh15Q99PJ1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC24.14■■□□□ 1.45
Pcdh15Q99PJ1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC24.14■■□□□ 1.45
Pcdh15Q99PJ1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pcdh15Q99PJ1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdh15Q99PJ1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC24.13■■□□□ 1.45
Pcdh15Q99PJ1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdh15Q99PJ1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdh15Q99PJ1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pcdh15Q99PJ1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.13■■□□□ 1.45
Pcdh15Q99PJ1 AV356131-201ENSMUST00000206201 750 ntBASIC24.12■■□□□ 1.45
Pcdh15Q99PJ1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC24.12■■□□□ 1.45
Pcdh15Q99PJ1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdh15Q99PJ1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdh15Q99PJ1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdh15Q99PJ1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC24.12■■□□□ 1.45
Pcdh15Q99PJ1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdh15Q99PJ1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pcdh15Q99PJ1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC24.11■■□□□ 1.45
Pcdh15Q99PJ1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdh15Q99PJ1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdh15Q99PJ1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Pcdh15Q99PJ1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pcdh15Q99PJ1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdh15Q99PJ1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Pcdh15Q99PJ1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Pcdh15Q99PJ1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdh15Q99PJ1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.1■■□□□ 1.45
Pcdh15Q99PJ1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pcdh15Q99PJ1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC24.1■■□□□ 1.45
Pcdh15Q99PJ1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC24.09■■□□□ 1.45
Pcdh15Q99PJ1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdh15Q99PJ1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Pcdh15Q99PJ1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pcdh15Q99PJ1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Pcdh15Q99PJ1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdh15Q99PJ1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdh15Q99PJ1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC24.08■■□□□ 1.45
Pcdh15Q99PJ1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC24.08■■□□□ 1.45
Pcdh15Q99PJ1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC24.08■■□□□ 1.45
Pcdh15Q99PJ1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdh15Q99PJ1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pcdh15Q99PJ1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.07■■□□□ 1.44
Pcdh15Q99PJ1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdh15Q99PJ1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdh15Q99PJ1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdh15Q99PJ1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh15Q99PJ1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh15Q99PJ1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh15Q99PJ1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh15Q99PJ1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh15Q99PJ1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh15Q99PJ1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC24.06■■□□□ 1.44
Pcdh15Q99PJ1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdh15Q99PJ1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC24.06■■□□□ 1.44
Pcdh15Q99PJ1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC24.05■■□□□ 1.44
Pcdh15Q99PJ1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC24.05■■□□□ 1.44
Pcdh15Q99PJ1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdh15Q99PJ1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Pcdh15Q99PJ1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdh15Q99PJ1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Pcdh15Q99PJ1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdh15Q99PJ1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdh15Q99PJ1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdh15Q99PJ1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdh15Q99PJ1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdh15Q99PJ1 Gm18671-201ENSMUST00000214826 683 ntBASIC24.03■■□□□ 1.44
Pcdh15Q99PJ1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Pcdh15Q99PJ1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdh15Q99PJ1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.02■■□□□ 1.44
Pcdh15Q99PJ1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdh15Q99PJ1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Pcdh15Q99PJ1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC24.02■■□□□ 1.44
Pcdh15Q99PJ1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdh15Q99PJ1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Pcdh15Q99PJ1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Pcdh15Q99PJ1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms