Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.8■□□□□ 0.76
Vmp1Q99KU0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vmp1Q99KU0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vmp1Q99KU0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vmp1Q99KU0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Vmp1Q99KU0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Vmp1Q99KU0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vmp1Q99KU0 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.79■□□□□ 0.76
Vmp1Q99KU0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Vmp1Q99KU0 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.79■□□□□ 0.76
Vmp1Q99KU0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Vmp1Q99KU0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmp1Q99KU0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmp1Q99KU0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmp1Q99KU0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmp1Q99KU0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmp1Q99KU0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vmp1Q99KU0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.78■□□□□ 0.76
Vmp1Q99KU0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Vmp1Q99KU0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vmp1Q99KU0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vmp1Q99KU0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vmp1Q99KU0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Vmp1Q99KU0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vmp1Q99KU0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vmp1Q99KU0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vmp1Q99KU0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vmp1Q99KU0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vmp1Q99KU0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vmp1Q99KU0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vmp1Q99KU0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vmp1Q99KU0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vmp1Q99KU0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.75■□□□□ 0.75
Vmp1Q99KU0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Vmp1Q99KU0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmp1Q99KU0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vmp1Q99KU0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmp1Q99KU0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.74■□□□□ 0.75
Vmp1Q99KU0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Vmp1Q99KU0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmp1Q99KU0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmp1Q99KU0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vmp1Q99KU0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vmp1Q99KU0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmp1Q99KU0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Vmp1Q99KU0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmp1Q99KU0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmp1Q99KU0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmp1Q99KU0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Vmp1Q99KU0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
Vmp1Q99KU0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.73■□□□□ 0.75
Vmp1Q99KU0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vmp1Q99KU0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vmp1Q99KU0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmp1Q99KU0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmp1Q99KU0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vmp1Q99KU0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vmp1Q99KU0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmp1Q99KU0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.72■□□□□ 0.75
Vmp1Q99KU0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vmp1Q99KU0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmp1Q99KU0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vmp1Q99KU0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmp1Q99KU0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmp1Q99KU0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Vmp1Q99KU0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmp1Q99KU0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmp1Q99KU0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vmp1Q99KU0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vmp1Q99KU0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vmp1Q99KU0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vmp1Q99KU0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Vmp1Q99KU0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vmp1Q99KU0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vmp1Q99KU0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vmp1Q99KU0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
Vmp1Q99KU0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vmp1Q99KU0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmp1Q99KU0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmp1Q99KU0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Vmp1Q99KU0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmp1Q99KU0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vmp1Q99KU0 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.69■□□□□ 0.74
Vmp1Q99KU0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmp1Q99KU0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmp1Q99KU0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmp1Q99KU0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmp1Q99KU0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms