Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Homer3Q99JP6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.54■□□□□ 0.88
Homer3Q99JP6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Homer3Q99JP6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Homer3Q99JP6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Homer3Q99JP6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Homer3Q99JP6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Homer3Q99JP6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.53■□□□□ 0.88
Homer3Q99JP6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Homer3Q99JP6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Homer3Q99JP6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Homer3Q99JP6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Homer3Q99JP6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Homer3Q99JP6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Homer3Q99JP6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Homer3Q99JP6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Homer3Q99JP6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Homer3Q99JP6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Homer3Q99JP6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Homer3Q99JP6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.52■□□□□ 0.88
Homer3Q99JP6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Homer3Q99JP6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Homer3Q99JP6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Homer3Q99JP6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Homer3Q99JP6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Homer3Q99JP6 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.51■□□□□ 0.87
Homer3Q99JP6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Homer3Q99JP6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Homer3Q99JP6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Homer3Q99JP6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.51■□□□□ 0.87
Homer3Q99JP6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Homer3Q99JP6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Homer3Q99JP6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Homer3Q99JP6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Homer3Q99JP6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Homer3Q99JP6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Homer3Q99JP6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.49■□□□□ 0.87
Homer3Q99JP6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Homer3Q99JP6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Homer3Q99JP6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Homer3Q99JP6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Homer3Q99JP6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Homer3Q99JP6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Homer3Q99JP6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Homer3Q99JP6 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Homer3Q99JP6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Homer3Q99JP6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Homer3Q99JP6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Homer3Q99JP6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Homer3Q99JP6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Homer3Q99JP6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Homer3Q99JP6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Homer3Q99JP6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Homer3Q99JP6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Homer3Q99JP6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Homer3Q99JP6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Homer3Q99JP6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Homer3Q99JP6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Homer3Q99JP6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Homer3Q99JP6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.46■□□□□ 0.87
Homer3Q99JP6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Homer3Q99JP6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Homer3Q99JP6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Homer3Q99JP6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Homer3Q99JP6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Homer3Q99JP6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Homer3Q99JP6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Homer3Q99JP6 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.45■□□□□ 0.86
Homer3Q99JP6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Homer3Q99JP6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Homer3Q99JP6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.45■□□□□ 0.86
Homer3Q99JP6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Homer3Q99JP6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Homer3Q99JP6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Homer3Q99JP6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Homer3Q99JP6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Homer3Q99JP6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Homer3Q99JP6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Homer3Q99JP6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Homer3Q99JP6 Gm14523-201ENSMUST00000117260 558 ntBASIC20.44■□□□□ 0.86
Homer3Q99JP6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.44■□□□□ 0.86
Homer3Q99JP6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Homer3Q99JP6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.44■□□□□ 0.86
Homer3Q99JP6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Homer3Q99JP6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Homer3Q99JP6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Homer3Q99JP6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Homer3Q99JP6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Homer3Q99JP6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Homer3Q99JP6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Homer3Q99JP6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Homer3Q99JP6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms