Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chmp1aQ921W0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Chmp1aQ921W0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp1aQ921W0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp1aQ921W0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp1aQ921W0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Chmp1aQ921W0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp1aQ921W0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp1aQ921W0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chmp1aQ921W0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp1aQ921W0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp1aQ921W0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Chmp1aQ921W0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Chmp1aQ921W0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp1aQ921W0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp1aQ921W0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp1aQ921W0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp1aQ921W0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp1aQ921W0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp1aQ921W0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp1aQ921W0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp1aQ921W0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp1aQ921W0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp1aQ921W0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp1aQ921W0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp1aQ921W0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Chmp1aQ921W0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp1aQ921W0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Chmp1aQ921W0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp1aQ921W0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Chmp1aQ921W0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp1aQ921W0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Chmp1aQ921W0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp1aQ921W0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp1aQ921W0 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.07■□□□□ 0.48
Chmp1aQ921W0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chmp1aQ921W0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Gm9806-201ENSMUST00000051080 552 ntBASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp1aQ921W0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Scarna2-201ENSMUST00000157560 414 ntBASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp1aQ921W0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms