Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdha8Q91Y12 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha8Q91Y12 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdha8Q91Y12 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha8Q91Y12 Gm10232-201ENSMUST00000089221 720 ntBASIC20.07■□□□□ 0.8
Pcdha8Q91Y12 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha8Q91Y12 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Pcdha8Q91Y12 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdha8Q91Y12 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdha8Q91Y12 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha8Q91Y12 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha8Q91Y12 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdha8Q91Y12 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdha8Q91Y12 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha8Q91Y12 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdha8Q91Y12 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha8Q91Y12 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha8Q91Y12 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdha8Q91Y12 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha8Q91Y12 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdha8Q91Y12 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha8Q91Y12 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdha8Q91Y12 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha8Q91Y12 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha8Q91Y12 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha8Q91Y12 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdha8Q91Y12 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.04■□□□□ 0.8
Pcdha8Q91Y12 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.04■□□□□ 0.8
Pcdha8Q91Y12 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha8Q91Y12 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha8Q91Y12 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdha8Q91Y12 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Pcdha8Q91Y12 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha8Q91Y12 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha8Q91Y12 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha8Q91Y12 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdha8Q91Y12 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdha8Q91Y12 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdha8Q91Y12 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Pcdha8Q91Y12 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha8Q91Y12 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha8Q91Y12 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
Pcdha8Q91Y12 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdha8Q91Y12 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Pcdha8Q91Y12 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
Pcdha8Q91Y12 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha8Q91Y12 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha8Q91Y12 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha8Q91Y12 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha8Q91Y12 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha8Q91Y12 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdha8Q91Y12 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha8Q91Y12 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha8Q91Y12 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha8Q91Y12 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20■□□□□ 0.79
Pcdha8Q91Y12 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha8Q91Y12 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha8Q91Y12 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha8Q91Y12 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha8Q91Y12 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdha8Q91Y12 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha8Q91Y12 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha8Q91Y12 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdha8Q91Y12 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha8Q91Y12 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Pcdha8Q91Y12 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha8Q91Y12 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha8Q91Y12 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdha8Q91Y12 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha8Q91Y12 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha8Q91Y12 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.98■□□□□ 0.79
Pcdha8Q91Y12 Gm10399-202ENSMUST00000202768 748 ntBASIC19.98■□□□□ 0.79
Pcdha8Q91Y12 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdha8Q91Y12 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha8Q91Y12 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdha8Q91Y12 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdha8Q91Y12 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdha8Q91Y12 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha8Q91Y12 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha8Q91Y12 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha8Q91Y12 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.97■□□□□ 0.79
Pcdha8Q91Y12 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdha8Q91Y12 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha8Q91Y12 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha8Q91Y12 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.96■□□□□ 0.79
Pcdha8Q91Y12 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha8Q91Y12 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.96■□□□□ 0.79
Pcdha8Q91Y12 Gm5812-201ENSMUST00000061073 957 ntBASIC19.96■□□□□ 0.79
Pcdha8Q91Y12 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdha8Q91Y12 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms