Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb20Q91XZ9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb20Q91XZ9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Pcdhb20Q91XZ9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhb20Q91XZ9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.8■□□□□ 0.76
Pcdhb20Q91XZ9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb20Q91XZ9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb20Q91XZ9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb20Q91XZ9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdhb20Q91XZ9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb20Q91XZ9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb20Q91XZ9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb20Q91XZ9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdhb20Q91XZ9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.78■□□□□ 0.76
Pcdhb20Q91XZ9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb20Q91XZ9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhb20Q91XZ9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhb20Q91XZ9 Golgb1-201ENSMUST00000023534 498 ntBASIC19.77■□□□□ 0.76
Pcdhb20Q91XZ9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb20Q91XZ9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb20Q91XZ9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb20Q91XZ9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb20Q91XZ9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhb20Q91XZ9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhb20Q91XZ9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb20Q91XZ9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb20Q91XZ9 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.75■□□□□ 0.75
Pcdhb20Q91XZ9 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb20Q91XZ9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb20Q91XZ9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhb20Q91XZ9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb20Q91XZ9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhb20Q91XZ9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb20Q91XZ9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb20Q91XZ9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhb20Q91XZ9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb20Q91XZ9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb20Q91XZ9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb20Q91XZ9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhb20Q91XZ9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhb20Q91XZ9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb20Q91XZ9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb20Q91XZ9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb20Q91XZ9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb20Q91XZ9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Pcdhb20Q91XZ9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb20Q91XZ9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb20Q91XZ9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.71■□□□□ 0.75
Pcdhb20Q91XZ9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb20Q91XZ9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb20Q91XZ9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb20Q91XZ9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb20Q91XZ9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdhb20Q91XZ9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb20Q91XZ9 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.71■□□□□ 0.75
Pcdhb20Q91XZ9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Pcdhb20Q91XZ9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhb20Q91XZ9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms