Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga9Q91XX9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.45■□□□□ 0.86
Pcdhga9Q91XX9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga9Q91XX9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhga9Q91XX9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga9Q91XX9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdhga9Q91XX9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pcdhga9Q91XX9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga9Q91XX9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhga9Q91XX9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhga9Q91XX9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhga9Q91XX9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhga9Q91XX9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhga9Q91XX9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga9Q91XX9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga9Q91XX9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga9Q91XX9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.41■□□□□ 0.86
Pcdhga9Q91XX9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga9Q91XX9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhga9Q91XX9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdhga9Q91XX9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.4■□□□□ 0.86
Pcdhga9Q91XX9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga9Q91XX9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga9Q91XX9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhga9Q91XX9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhga9Q91XX9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhga9Q91XX9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.39■□□□□ 0.85
Pcdhga9Q91XX9 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.39■□□□□ 0.85
Pcdhga9Q91XX9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhga9Q91XX9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhga9Q91XX9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga9Q91XX9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga9Q91XX9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga9Q91XX9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga9Q91XX9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhga9Q91XX9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhga9Q91XX9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhga9Q91XX9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga9Q91XX9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga9Q91XX9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhga9Q91XX9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhga9Q91XX9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga9Q91XX9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhga9Q91XX9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pcdhga9Q91XX9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhga9Q91XX9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga9Q91XX9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga9Q91XX9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga9Q91XX9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga9Q91XX9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga9Q91XX9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga9Q91XX9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhga9Q91XX9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Pcdhga9Q91XX9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga9Q91XX9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhga9Q91XX9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.35■□□□□ 0.85
Pcdhga9Q91XX9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga9Q91XX9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhga9Q91XX9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.34■□□□□ 0.85
Pcdhga9Q91XX9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms