Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
StrcQ8VIM6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
StrcQ8VIM6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
StrcQ8VIM6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
StrcQ8VIM6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
StrcQ8VIM6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
StrcQ8VIM6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
StrcQ8VIM6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
StrcQ8VIM6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
StrcQ8VIM6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
StrcQ8VIM6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC25.47■■□□□ 1.67
StrcQ8VIM6 Gm12669-201ENSMUST00000122162 1009 ntBASIC25.47■■□□□ 1.67
StrcQ8VIM6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
StrcQ8VIM6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
StrcQ8VIM6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
StrcQ8VIM6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC25.45■■□□□ 1.67
StrcQ8VIM6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
StrcQ8VIM6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
StrcQ8VIM6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
StrcQ8VIM6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
StrcQ8VIM6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
StrcQ8VIM6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC25.44■■□□□ 1.66
StrcQ8VIM6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC25.44■■□□□ 1.66
StrcQ8VIM6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
StrcQ8VIM6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
StrcQ8VIM6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
StrcQ8VIM6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
StrcQ8VIM6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC25.44■■□□□ 1.66
StrcQ8VIM6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC25.44■■□□□ 1.66
StrcQ8VIM6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
StrcQ8VIM6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
StrcQ8VIM6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
StrcQ8VIM6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
StrcQ8VIM6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
StrcQ8VIM6 Smad6-203ENSMUST00000179458 273 ntBASIC25.42■■□□□ 1.66
StrcQ8VIM6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC25.42■■□□□ 1.66
StrcQ8VIM6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
StrcQ8VIM6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC25.42■■□□□ 1.66
StrcQ8VIM6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
StrcQ8VIM6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC25.41■■□□□ 1.66
StrcQ8VIM6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC25.41■■□□□ 1.66
StrcQ8VIM6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
StrcQ8VIM6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC25.4■■□□□ 1.66
StrcQ8VIM6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC25.4■■□□□ 1.66
StrcQ8VIM6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
StrcQ8VIM6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
StrcQ8VIM6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC25.4■■□□□ 1.66
StrcQ8VIM6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
StrcQ8VIM6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
StrcQ8VIM6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
StrcQ8VIM6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
StrcQ8VIM6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
StrcQ8VIM6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC25.39■■□□□ 1.65
StrcQ8VIM6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
StrcQ8VIM6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
StrcQ8VIM6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
StrcQ8VIM6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
StrcQ8VIM6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
StrcQ8VIM6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC25.37■■□□□ 1.65
StrcQ8VIM6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
StrcQ8VIM6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
StrcQ8VIM6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
StrcQ8VIM6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
StrcQ8VIM6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
StrcQ8VIM6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
StrcQ8VIM6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
StrcQ8VIM6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC25.36■■□□□ 1.65
StrcQ8VIM6 AV356131-201ENSMUST00000206201 750 ntBASIC25.36■■□□□ 1.65
StrcQ8VIM6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC25.36■■□□□ 1.65
StrcQ8VIM6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
StrcQ8VIM6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
StrcQ8VIM6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
StrcQ8VIM6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
StrcQ8VIM6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC25.35■■□□□ 1.65
StrcQ8VIM6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC25.35■■□□□ 1.65
StrcQ8VIM6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
StrcQ8VIM6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
StrcQ8VIM6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
StrcQ8VIM6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC25.34■■□□□ 1.65
StrcQ8VIM6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC25.34■■□□□ 1.65
StrcQ8VIM6 Gm18671-201ENSMUST00000214826 683 ntBASIC25.34■■□□□ 1.65
StrcQ8VIM6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
StrcQ8VIM6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
StrcQ8VIM6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
StrcQ8VIM6 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
StrcQ8VIM6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC25.34■■□□□ 1.65
StrcQ8VIM6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC25.33■■□□□ 1.65
StrcQ8VIM6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
StrcQ8VIM6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC25.33■■□□□ 1.64
StrcQ8VIM6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
StrcQ8VIM6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
StrcQ8VIM6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
StrcQ8VIM6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.32■■□□□ 1.64
StrcQ8VIM6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC25.32■■□□□ 1.64
StrcQ8VIM6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
StrcQ8VIM6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
StrcQ8VIM6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
StrcQ8VIM6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC25.31■■□□□ 1.64
StrcQ8VIM6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
StrcQ8VIM6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms