Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a20aQ8VDB9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc6a20aQ8VDB9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20aQ8VDB9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20aQ8VDB9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Slc6a20aQ8VDB9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20aQ8VDB9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20aQ8VDB9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20aQ8VDB9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20aQ8VDB9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Slc6a20aQ8VDB9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc6a20aQ8VDB9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Slc6a20aQ8VDB9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20aQ8VDB9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Slc6a20aQ8VDB9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20aQ8VDB9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20aQ8VDB9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20aQ8VDB9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20aQ8VDB9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc6a20aQ8VDB9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Slc6a20aQ8VDB9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a20aQ8VDB9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a20aQ8VDB9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Slc6a20aQ8VDB9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20aQ8VDB9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20aQ8VDB9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20aQ8VDB9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20aQ8VDB9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc6a20aQ8VDB9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
Slc6a20aQ8VDB9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20aQ8VDB9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.38■□□□□ 0.85
Slc6a20aQ8VDB9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20aQ8VDB9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.38■□□□□ 0.85
Slc6a20aQ8VDB9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20aQ8VDB9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20aQ8VDB9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc6a20aQ8VDB9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a20aQ8VDB9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.37■□□□□ 0.85
Slc6a20aQ8VDB9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Slc6a20aQ8VDB9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a20aQ8VDB9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc6a20aQ8VDB9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Slc6a20aQ8VDB9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.36■□□□□ 0.85
Slc6a20aQ8VDB9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Slc6a20aQ8VDB9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Slc6a20aQ8VDB9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc6a20aQ8VDB9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.35■□□□□ 0.85
Slc6a20aQ8VDB9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20aQ8VDB9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20aQ8VDB9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20aQ8VDB9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20aQ8VDB9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20aQ8VDB9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20aQ8VDB9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc6a20aQ8VDB9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc6a20aQ8VDB9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a20aQ8VDB9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a20aQ8VDB9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a20aQ8VDB9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.33■□□□□ 0.85
Slc6a20aQ8VDB9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a20aQ8VDB9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc6a20aQ8VDB9 Gm10232-201ENSMUST00000089221 720 ntBASIC20.33■□□□□ 0.85
Slc6a20aQ8VDB9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc6a20aQ8VDB9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a20aQ8VDB9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Slc6a20aQ8VDB9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a20aQ8VDB9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc6a20aQ8VDB9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Slc6a20aQ8VDB9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.32■□□□□ 0.84
Slc6a20aQ8VDB9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a20aQ8VDB9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a20aQ8VDB9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.31■□□□□ 0.84
Slc6a20aQ8VDB9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc6a20aQ8VDB9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20aQ8VDB9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20aQ8VDB9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slc6a20aQ8VDB9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20aQ8VDB9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20aQ8VDB9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20aQ8VDB9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.3■□□□□ 0.84
Slc6a20aQ8VDB9 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.3■□□□□ 0.84
Slc6a20aQ8VDB9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slc6a20aQ8VDB9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc6a20aQ8VDB9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.29■□□□□ 0.84
Slc6a20aQ8VDB9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20aQ8VDB9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.29■□□□□ 0.84
Slc6a20aQ8VDB9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc6a20aQ8VDB9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms