Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps39Q8R5L3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.68■□□□□ 0.9
Vps39Q8R5L3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps39Q8R5L3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps39Q8R5L3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps39Q8R5L3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Vps39Q8R5L3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps39Q8R5L3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps39Q8R5L3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps39Q8R5L3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps39Q8R5L3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps39Q8R5L3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps39Q8R5L3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps39Q8R5L3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps39Q8R5L3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Vps39Q8R5L3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps39Q8R5L3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vps39Q8R5L3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps39Q8R5L3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps39Q8R5L3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps39Q8R5L3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Vps39Q8R5L3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Vps39Q8R5L3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps39Q8R5L3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps39Q8R5L3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps39Q8R5L3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vps39Q8R5L3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.65■□□□□ 0.9
Vps39Q8R5L3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.65■□□□□ 0.9
Vps39Q8R5L3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps39Q8R5L3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Vps39Q8R5L3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps39Q8R5L3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vps39Q8R5L3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Vps39Q8R5L3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Vps39Q8R5L3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps39Q8R5L3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.64■□□□□ 0.89
Vps39Q8R5L3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Vps39Q8R5L3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps39Q8R5L3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps39Q8R5L3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps39Q8R5L3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps39Q8R5L3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.64■□□□□ 0.89
Vps39Q8R5L3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps39Q8R5L3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps39Q8R5L3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps39Q8R5L3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps39Q8R5L3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps39Q8R5L3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vps39Q8R5L3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps39Q8R5L3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps39Q8R5L3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.62■□□□□ 0.89
Vps39Q8R5L3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps39Q8R5L3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps39Q8R5L3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps39Q8R5L3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Vps39Q8R5L3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.62■□□□□ 0.89
Vps39Q8R5L3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps39Q8R5L3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps39Q8R5L3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps39Q8R5L3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps39Q8R5L3 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.61■□□□□ 0.89
Vps39Q8R5L3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.61■□□□□ 0.89
Vps39Q8R5L3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps39Q8R5L3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps39Q8R5L3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps39Q8R5L3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Vps39Q8R5L3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Vps39Q8R5L3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.59■□□□□ 0.89
Vps39Q8R5L3 Gm5921-201ENSMUST00000075898 882 ntBASIC20.59■□□□□ 0.89
Vps39Q8R5L3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps39Q8R5L3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Vps39Q8R5L3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps39Q8R5L3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps39Q8R5L3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Vps39Q8R5L3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Vps39Q8R5L3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps39Q8R5L3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps39Q8R5L3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps39Q8R5L3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vps39Q8R5L3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.58■□□□□ 0.89
Vps39Q8R5L3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Vps39Q8R5L3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps39Q8R5L3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps39Q8R5L3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps39Q8R5L3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vps39Q8R5L3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vps39Q8R5L3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms