Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf113a1Q8R3P8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf113a1Q8R3P8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf113a1Q8R3P8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Rnf113a1Q8R3P8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf113a1Q8R3P8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf113a1Q8R3P8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rnf113a1Q8R3P8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.04■□□□□ 0.48
Rnf113a1Q8R3P8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.03■□□□□ 0.48
Rnf113a1Q8R3P8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.03■□□□□ 0.48
Rnf113a1Q8R3P8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf113a1Q8R3P8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf113a1Q8R3P8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rnf113a1Q8R3P8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rnf113a1Q8R3P8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf113a1Q8R3P8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rnf113a1Q8R3P8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf113a1Q8R3P8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf113a1Q8R3P8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rnf113a1Q8R3P8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Gm7417-201ENSMUST00000192950 473 ntBASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rnf113a1Q8R3P8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf113a1Q8R3P8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf113a1Q8R3P8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf113a1Q8R3P8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf113a1Q8R3P8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf113a1Q8R3P8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf113a1Q8R3P8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.99■□□□□ 0.47
Rnf113a1Q8R3P8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf113a1Q8R3P8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Rnf113a1Q8R3P8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf113a1Q8R3P8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf113a1Q8R3P8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf113a1Q8R3P8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf113a1Q8R3P8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf113a1Q8R3P8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf113a1Q8R3P8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf113a1Q8R3P8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf113a1Q8R3P8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf113a1Q8R3P8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.96■□□□□ 0.47
Rnf113a1Q8R3P8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.96■□□□□ 0.47
Rnf113a1Q8R3P8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rnf113a1Q8R3P8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf113a1Q8R3P8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.94■□□□□ 0.46
Rnf113a1Q8R3P8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf113a1Q8R3P8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms