Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tm6sf2Q8R1J1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tm6sf2Q8R1J1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tm6sf2Q8R1J1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tm6sf2Q8R1J1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tm6sf2Q8R1J1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tm6sf2Q8R1J1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tm6sf2Q8R1J1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tm6sf2Q8R1J1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tm6sf2Q8R1J1 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.42■□□□□ 0.7
Tm6sf2Q8R1J1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tm6sf2Q8R1J1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tm6sf2Q8R1J1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Tm6sf2Q8R1J1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tm6sf2Q8R1J1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tm6sf2Q8R1J1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tm6sf2Q8R1J1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tm6sf2Q8R1J1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tm6sf2Q8R1J1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.4■□□□□ 0.7
Tm6sf2Q8R1J1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.4■□□□□ 0.7
Tm6sf2Q8R1J1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tm6sf2Q8R1J1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
Tm6sf2Q8R1J1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.4■□□□□ 0.7
Tm6sf2Q8R1J1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Tm6sf2Q8R1J1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tm6sf2Q8R1J1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Tm6sf2Q8R1J1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tm6sf2Q8R1J1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tm6sf2Q8R1J1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tm6sf2Q8R1J1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tm6sf2Q8R1J1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tm6sf2Q8R1J1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tm6sf2Q8R1J1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tm6sf2Q8R1J1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.37■□□□□ 0.69
Tm6sf2Q8R1J1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tm6sf2Q8R1J1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tm6sf2Q8R1J1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tm6sf2Q8R1J1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Tm6sf2Q8R1J1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tm6sf2Q8R1J1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tm6sf2Q8R1J1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tm6sf2Q8R1J1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tm6sf2Q8R1J1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tm6sf2Q8R1J1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.36■□□□□ 0.69
Tm6sf2Q8R1J1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.36■□□□□ 0.69
Tm6sf2Q8R1J1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tm6sf2Q8R1J1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Tm6sf2Q8R1J1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.35■□□□□ 0.69
Tm6sf2Q8R1J1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tm6sf2Q8R1J1 Gm9847-201ENSMUST00000052528 599 ntBASIC19.35■□□□□ 0.69
Tm6sf2Q8R1J1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Tm6sf2Q8R1J1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
Tm6sf2Q8R1J1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.33■□□□□ 0.69
Tm6sf2Q8R1J1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tm6sf2Q8R1J1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Tm6sf2Q8R1J1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Tm6sf2Q8R1J1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tm6sf2Q8R1J1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tm6sf2Q8R1J1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.33■□□□□ 0.68
Tm6sf2Q8R1J1 Gm9870-201ENSMUST00000063874 645 ntBASIC19.33■□□□□ 0.68
Tm6sf2Q8R1J1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Tm6sf2Q8R1J1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tm6sf2Q8R1J1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tm6sf2Q8R1J1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tm6sf2Q8R1J1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tm6sf2Q8R1J1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tm6sf2Q8R1J1 Gm12922-201ENSMUST00000120626 809 ntBASIC19.32■□□□□ 0.68
Tm6sf2Q8R1J1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.32■□□□□ 0.68
Tm6sf2Q8R1J1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.32■□□□□ 0.68
Tm6sf2Q8R1J1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tm6sf2Q8R1J1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tm6sf2Q8R1J1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tm6sf2Q8R1J1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tm6sf2Q8R1J1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tm6sf2Q8R1J1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms