Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Atf7Q8R0S1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.49■■□□□ 1.51
Atf7Q8R0S1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Atf7Q8R0S1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Atf7Q8R0S1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Atf7Q8R0S1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Atf7Q8R0S1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Atf7Q8R0S1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Atf7Q8R0S1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Atf7Q8R0S1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.47■■□□□ 1.51
Atf7Q8R0S1 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.47■■□□□ 1.51
Atf7Q8R0S1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atf7Q8R0S1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atf7Q8R0S1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Atf7Q8R0S1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Atf7Q8R0S1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Atf7Q8R0S1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Atf7Q8R0S1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.46■■□□□ 1.51
Atf7Q8R0S1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Atf7Q8R0S1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Atf7Q8R0S1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Atf7Q8R0S1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Atf7Q8R0S1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.45■■□□□ 1.5
Atf7Q8R0S1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Atf7Q8R0S1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Atf7Q8R0S1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Atf7Q8R0S1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Atf7Q8R0S1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Atf7Q8R0S1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Atf7Q8R0S1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Atf7Q8R0S1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Atf7Q8R0S1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Atf7Q8R0S1 Gm5812-201ENSMUST00000061073 957 ntBASIC24.44■■□□□ 1.5
Atf7Q8R0S1 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.43■■□□□ 1.5
Atf7Q8R0S1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Atf7Q8R0S1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Atf7Q8R0S1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Atf7Q8R0S1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Atf7Q8R0S1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Atf7Q8R0S1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC24.43■■□□□ 1.5
Atf7Q8R0S1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Atf7Q8R0S1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Atf7Q8R0S1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.42■■□□□ 1.5
Atf7Q8R0S1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.42■■□□□ 1.5
Atf7Q8R0S1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Atf7Q8R0S1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Atf7Q8R0S1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Atf7Q8R0S1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Atf7Q8R0S1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Atf7Q8R0S1 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.41■■□□□ 1.5
Atf7Q8R0S1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Atf7Q8R0S1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Atf7Q8R0S1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Atf7Q8R0S1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Atf7Q8R0S1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Atf7Q8R0S1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Atf7Q8R0S1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Atf7Q8R0S1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Atf7Q8R0S1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Atf7Q8R0S1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.39■■□□□ 1.49
Atf7Q8R0S1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.38■■□□□ 1.49
Atf7Q8R0S1 Gm40881-201ENSMUST00000223397 166 ntBASIC24.38■■□□□ 1.49
Atf7Q8R0S1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Atf7Q8R0S1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Atf7Q8R0S1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Atf7Q8R0S1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Atf7Q8R0S1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.37■■□□□ 1.49
Atf7Q8R0S1 Gm15820-201ENSMUST00000201566 728 ntBASIC24.37■■□□□ 1.49
Atf7Q8R0S1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC24.36■■□□□ 1.49
Atf7Q8R0S1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.36■■□□□ 1.49
Atf7Q8R0S1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.36■■□□□ 1.49
Atf7Q8R0S1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.36■■□□□ 1.49
Atf7Q8R0S1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Atf7Q8R0S1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Atf7Q8R0S1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Atf7Q8R0S1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Atf7Q8R0S1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Atf7Q8R0S1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Atf7Q8R0S1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.35■■□□□ 1.49
Atf7Q8R0S1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Atf7Q8R0S1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Atf7Q8R0S1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Atf7Q8R0S1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Atf7Q8R0S1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Atf7Q8R0S1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Atf7Q8R0S1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Atf7Q8R0S1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.34■■□□□ 1.49
Atf7Q8R0S1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Atf7Q8R0S1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Atf7Q8R0S1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms