Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alms1Q8K4E0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alms1Q8K4E0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Alms1Q8K4E0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alms1Q8K4E0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.43■□□□□ 0.86
Alms1Q8K4E0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alms1Q8K4E0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Alms1Q8K4E0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alms1Q8K4E0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alms1Q8K4E0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alms1Q8K4E0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Alms1Q8K4E0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alms1Q8K4E0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alms1Q8K4E0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alms1Q8K4E0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alms1Q8K4E0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alms1Q8K4E0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Alms1Q8K4E0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alms1Q8K4E0 Gm12251-201ENSMUST00000117893 792 ntBASIC20.4■□□□□ 0.86
Alms1Q8K4E0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.4■□□□□ 0.86
Alms1Q8K4E0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Alms1Q8K4E0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alms1Q8K4E0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Alms1Q8K4E0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.4■□□□□ 0.86
Alms1Q8K4E0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.4■□□□□ 0.86
Alms1Q8K4E0 Mir7075-201ENSMUST00000184187 82 ntBASIC20.39■□□□□ 0.86
Alms1Q8K4E0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Alms1Q8K4E0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Alms1Q8K4E0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alms1Q8K4E0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alms1Q8K4E0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Alms1Q8K4E0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alms1Q8K4E0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alms1Q8K4E0 Gm43173-201ENSMUST00000202246 593 ntBASIC20.38■□□□□ 0.85
Alms1Q8K4E0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alms1Q8K4E0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Alms1Q8K4E0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Alms1Q8K4E0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alms1Q8K4E0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alms1Q8K4E0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.37■□□□□ 0.85
Alms1Q8K4E0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.37■□□□□ 0.85
Alms1Q8K4E0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.37■□□□□ 0.85
Alms1Q8K4E0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.37■□□□□ 0.85
Alms1Q8K4E0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.37■□□□□ 0.85
Alms1Q8K4E0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Alms1Q8K4E0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Alms1Q8K4E0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Alms1Q8K4E0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alms1Q8K4E0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alms1Q8K4E0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alms1Q8K4E0 Gm7291-201ENSMUST00000199147 382 ntBASIC20.35■□□□□ 0.85
Alms1Q8K4E0 Gm9870-201ENSMUST00000063874 645 ntBASIC20.35■□□□□ 0.85
Alms1Q8K4E0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Alms1Q8K4E0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.34■□□□□ 0.85
Alms1Q8K4E0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alms1Q8K4E0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Alms1Q8K4E0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.34■□□□□ 0.85
Alms1Q8K4E0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Alms1Q8K4E0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.34■□□□□ 0.85
Alms1Q8K4E0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.34■□□□□ 0.85
Alms1Q8K4E0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alms1Q8K4E0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Alms1Q8K4E0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.33■□□□□ 0.84
Alms1Q8K4E0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alms1Q8K4E0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
Alms1Q8K4E0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Alms1Q8K4E0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Alms1Q8K4E0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Alms1Q8K4E0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alms1Q8K4E0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Alms1Q8K4E0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Alms1Q8K4E0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alms1Q8K4E0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Alms1Q8K4E0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Alms1Q8K4E0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms