Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn1Q8K445 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.5■□□□□ 0.71
Clrn1Q8K445 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn1Q8K445 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn1Q8K445 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn1Q8K445 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn1Q8K445 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Clrn1Q8K445 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn1Q8K445 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn1Q8K445 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn1Q8K445 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.49■□□□□ 0.71
Clrn1Q8K445 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.49■□□□□ 0.71
Clrn1Q8K445 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn1Q8K445 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn1Q8K445 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn1Q8K445 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn1Q8K445 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn1Q8K445 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn1Q8K445 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.48■□□□□ 0.71
Clrn1Q8K445 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn1Q8K445 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn1Q8K445 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.48■□□□□ 0.71
Clrn1Q8K445 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Clrn1Q8K445 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn1Q8K445 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn1Q8K445 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Clrn1Q8K445 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn1Q8K445 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn1Q8K445 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn1Q8K445 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn1Q8K445 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.47■□□□□ 0.71
Clrn1Q8K445 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn1Q8K445 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn1Q8K445 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn1Q8K445 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Clrn1Q8K445 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Clrn1Q8K445 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn1Q8K445 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn1Q8K445 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn1Q8K445 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Clrn1Q8K445 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn1Q8K445 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn1Q8K445 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn1Q8K445 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.45■□□□□ 0.7
Clrn1Q8K445 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.45■□□□□ 0.7
Clrn1Q8K445 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clrn1Q8K445 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn1Q8K445 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn1Q8K445 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn1Q8K445 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn1Q8K445 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn1Q8K445 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn1Q8K445 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn1Q8K445 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn1Q8K445 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.44■□□□□ 0.7
Clrn1Q8K445 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn1Q8K445 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn1Q8K445 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn1Q8K445 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn1Q8K445 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.43■□□□□ 0.7
Clrn1Q8K445 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clrn1Q8K445 Gm40881-201ENSMUST00000223397 166 ntBASIC19.43■□□□□ 0.7
Clrn1Q8K445 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn1Q8K445 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn1Q8K445 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn1Q8K445 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn1Q8K445 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn1Q8K445 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn1Q8K445 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn1Q8K445 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn1Q8K445 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.42■□□□□ 0.7
Clrn1Q8K445 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn1Q8K445 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn1Q8K445 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn1Q8K445 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clrn1Q8K445 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Clrn1Q8K445 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Clrn1Q8K445 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn1Q8K445 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn1Q8K445 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.41■□□□□ 0.7
Clrn1Q8K445 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn1Q8K445 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn1Q8K445 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Clrn1Q8K445 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clrn1Q8K445 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn1Q8K445 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn1Q8K445 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn1Q8K445 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn1Q8K445 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn1Q8K445 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn1Q8K445 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn1Q8K445 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn1Q8K445 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn1Q8K445 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clrn1Q8K445 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.39■□□□□ 0.69
Clrn1Q8K445 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clrn1Q8K445 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.39■□□□□ 0.69
Clrn1Q8K445 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.39■□□□□ 0.69
Clrn1Q8K445 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.39■□□□□ 0.69
Clrn1Q8K445 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms