Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cystm1Q8K353 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cystm1Q8K353 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cystm1Q8K353 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC12.85□□□□□ -0.35
Cystm1Q8K353 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC12.85□□□□□ -0.35
Cystm1Q8K353 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cystm1Q8K353 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Grk6-206ENSMUST00000224995 2971 ntBASIC12.84□□□□□ -0.35
Cystm1Q8K353 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cystm1Q8K353 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cystm1Q8K353 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cystm1Q8K353 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cystm1Q8K353 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC12.83□□□□□ -0.35
Cystm1Q8K353 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cystm1Q8K353 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cystm1Q8K353 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cystm1Q8K353 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cystm1Q8K353 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cystm1Q8K353 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.83□□□□□ -0.36
Cystm1Q8K353 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cystm1Q8K353 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cystm1Q8K353 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cystm1Q8K353 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.82□□□□□ -0.36
Cystm1Q8K353 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.82□□□□□ -0.36
Cystm1Q8K353 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC12.82□□□□□ -0.36
Cystm1Q8K353 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cystm1Q8K353 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cystm1Q8K353 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cystm1Q8K353 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cystm1Q8K353 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cystm1Q8K353 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cystm1Q8K353 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cystm1Q8K353 Terc-201ENSMUST00000082862 423 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms