Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpm6Q8CIR4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Trpm6Q8CIR4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.92■□□□□ 0.94
Trpm6Q8CIR4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpm6Q8CIR4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.92■□□□□ 0.94
Trpm6Q8CIR4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpm6Q8CIR4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpm6Q8CIR4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
Trpm6Q8CIR4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpm6Q8CIR4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trpm6Q8CIR4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 Gm18284-201ENSMUST00000172604 624 ntBASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trpm6Q8CIR4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Gm43530-201ENSMUST00000195920 274 ntBASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trpm6Q8CIR4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.89■□□□□ 0.94
Trpm6Q8CIR4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trpm6Q8CIR4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trpm6Q8CIR4 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.89■□□□□ 0.93
Trpm6Q8CIR4 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.89■□□□□ 0.93
Trpm6Q8CIR4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trpm6Q8CIR4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trpm6Q8CIR4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trpm6Q8CIR4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trpm6Q8CIR4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trpm6Q8CIR4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trpm6Q8CIR4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trpm6Q8CIR4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Gm43173-201ENSMUST00000202246 593 ntBASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trpm6Q8CIR4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trpm6Q8CIR4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trpm6Q8CIR4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trpm6Q8CIR4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trpm6Q8CIR4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trpm6Q8CIR4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trpm6Q8CIR4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trpm6Q8CIR4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.87■□□□□ 0.93
Trpm6Q8CIR4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trpm6Q8CIR4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trpm6Q8CIR4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.86■□□□□ 0.93
Trpm6Q8CIR4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.86■□□□□ 0.93
Trpm6Q8CIR4 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.86■□□□□ 0.93
Trpm6Q8CIR4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trpm6Q8CIR4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Trpm6Q8CIR4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trpm6Q8CIR4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trpm6Q8CIR4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.85■□□□□ 0.93
Trpm6Q8CIR4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trpm6Q8CIR4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trpm6Q8CIR4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trpm6Q8CIR4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trpm6Q8CIR4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trpm6Q8CIR4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.85■□□□□ 0.93
Trpm6Q8CIR4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trpm6Q8CIR4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.84■□□□□ 0.93
Trpm6Q8CIR4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.84■□□□□ 0.93
Trpm6Q8CIR4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.84■□□□□ 0.93
Trpm6Q8CIR4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trpm6Q8CIR4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trpm6Q8CIR4 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.83■□□□□ 0.93
Trpm6Q8CIR4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trpm6Q8CIR4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trpm6Q8CIR4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 772.3 ms