Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx6Q8C7R7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx6Q8C7R7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx6Q8C7R7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx6Q8C7R7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx6Q8C7R7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx6Q8C7R7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx6Q8C7R7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx6Q8C7R7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx6Q8C7R7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx6Q8C7R7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Gm12366-201ENSMUST00000121722 873 ntBASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Gm5786-201ENSMUST00000085368 882 ntBASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx6Q8C7R7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx6Q8C7R7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx6Q8C7R7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.92■□□□□ 0.94
Rfx6Q8C7R7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx6Q8C7R7 Gm10420-201ENSMUST00000121713 882 ntBASIC20.91■□□□□ 0.94
Rfx6Q8C7R7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rfx6Q8C7R7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Rfx6Q8C7R7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx6Q8C7R7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rfx6Q8C7R7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx6Q8C7R7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx6Q8C7R7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rfx6Q8C7R7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx6Q8C7R7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx6Q8C7R7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rfx6Q8C7R7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx6Q8C7R7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rfx6Q8C7R7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx6Q8C7R7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rfx6Q8C7R7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rfx6Q8C7R7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfx6Q8C7R7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfx6Q8C7R7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfx6Q8C7R7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Rfx6Q8C7R7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rfx6Q8C7R7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rfx6Q8C7R7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rfx6Q8C7R7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Rfx6Q8C7R7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx6Q8C7R7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx6Q8C7R7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx6Q8C7R7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx6Q8C7R7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Rfx6Q8C7R7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx6Q8C7R7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx6Q8C7R7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx6Q8C7R7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rfx6Q8C7R7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx6Q8C7R7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.87■□□□□ 0.93
Rfx6Q8C7R7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.87■□□□□ 0.93
Rfx6Q8C7R7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rfx6Q8C7R7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx6Q8C7R7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx6Q8C7R7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx6Q8C7R7 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.86■□□□□ 0.93
Rfx6Q8C7R7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx6Q8C7R7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx6Q8C7R7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx6Q8C7R7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Rfx6Q8C7R7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx6Q8C7R7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx6Q8C7R7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx6Q8C7R7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx6Q8C7R7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx6Q8C7R7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms