Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.64■□□□□ 0.73
Cdk5rap1Q8BTW8 Gm7143-201ENSMUST00000222811 859 ntBASIC19.64■□□□□ 0.73
Cdk5rap1Q8BTW8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk5rap1Q8BTW8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk5rap1Q8BTW8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdk5rap1Q8BTW8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.64■□□□□ 0.73
Cdk5rap1Q8BTW8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk5rap1Q8BTW8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk5rap1Q8BTW8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk5rap1Q8BTW8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk5rap1Q8BTW8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk5rap1Q8BTW8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk5rap1Q8BTW8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.63■□□□□ 0.73
Cdk5rap1Q8BTW8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.63■□□□□ 0.73
Cdk5rap1Q8BTW8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Cdk5rap1Q8BTW8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdk5rap1Q8BTW8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdk5rap1Q8BTW8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdk5rap1Q8BTW8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdk5rap1Q8BTW8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cdk5rap1Q8BTW8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap1Q8BTW8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.59■□□□□ 0.73
Cdk5rap1Q8BTW8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdk5rap1Q8BTW8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk5rap1Q8BTW8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdk5rap1Q8BTW8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Cdk5rap1Q8BTW8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk5rap1Q8BTW8 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.58■□□□□ 0.72
Cdk5rap1Q8BTW8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk5rap1Q8BTW8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk5rap1Q8BTW8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk5rap1Q8BTW8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdk5rap1Q8BTW8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap1Q8BTW8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap1Q8BTW8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Cdk5rap1Q8BTW8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap1Q8BTW8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap1Q8BTW8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap1Q8BTW8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdk5rap1Q8BTW8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Cdk5rap1Q8BTW8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap1Q8BTW8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap1Q8BTW8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
Cdk5rap1Q8BTW8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap1Q8BTW8 Gm27454-201ENSMUST00000185090 204 ntBASIC19.56■□□□□ 0.72
Cdk5rap1Q8BTW8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap1Q8BTW8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdk5rap1Q8BTW8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdk5rap1Q8BTW8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk5rap1Q8BTW8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Cdk5rap1Q8BTW8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cdk5rap1Q8BTW8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk5rap1Q8BTW8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdk5rap1Q8BTW8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.54■□□□□ 0.72
Cdk5rap1Q8BTW8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdk5rap1Q8BTW8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cdk5rap1Q8BTW8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms