Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne3Q8BT60 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne3Q8BT60 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne3Q8BT60 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.84■□□□□ 0.77
Cpne3Q8BT60 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne3Q8BT60 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne3Q8BT60 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne3Q8BT60 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cpne3Q8BT60 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne3Q8BT60 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne3Q8BT60 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cpne3Q8BT60 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.83■□□□□ 0.77
Cpne3Q8BT60 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpne3Q8BT60 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.83■□□□□ 0.76
Cpne3Q8BT60 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpne3Q8BT60 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Cpne3Q8BT60 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpne3Q8BT60 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpne3Q8BT60 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpne3Q8BT60 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpne3Q8BT60 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cpne3Q8BT60 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.82■□□□□ 0.76
Cpne3Q8BT60 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cpne3Q8BT60 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpne3Q8BT60 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cpne3Q8BT60 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cpne3Q8BT60 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cpne3Q8BT60 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpne3Q8BT60 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpne3Q8BT60 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpne3Q8BT60 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Cpne3Q8BT60 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpne3Q8BT60 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.8■□□□□ 0.76
Cpne3Q8BT60 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cpne3Q8BT60 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpne3Q8BT60 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpne3Q8BT60 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpne3Q8BT60 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpne3Q8BT60 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.79■□□□□ 0.76
Cpne3Q8BT60 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpne3Q8BT60 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpne3Q8BT60 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cpne3Q8BT60 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Cpne3Q8BT60 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpne3Q8BT60 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpne3Q8BT60 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.77■□□□□ 0.76
Cpne3Q8BT60 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cpne3Q8BT60 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.77■□□□□ 0.76
Cpne3Q8BT60 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpne3Q8BT60 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cpne3Q8BT60 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpne3Q8BT60 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.76■□□□□ 0.75
Cpne3Q8BT60 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms