Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smndc1Q8BGT7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.82■□□□□ 0.76
Smndc1Q8BGT7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smndc1Q8BGT7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Gm22567-201ENSMUST00000175542 342 ntBASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Gm44428-201ENSMUST00000204474 874 ntBASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smndc1Q8BGT7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smndc1Q8BGT7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smndc1Q8BGT7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smndc1Q8BGT7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.79■□□□□ 0.76
Smndc1Q8BGT7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Smndc1Q8BGT7 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.79■□□□□ 0.76
Smndc1Q8BGT7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Gm10420-201ENSMUST00000121713 882 ntBASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smndc1Q8BGT7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smndc1Q8BGT7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smndc1Q8BGT7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smndc1Q8BGT7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smndc1Q8BGT7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smndc1Q8BGT7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smndc1Q8BGT7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smndc1Q8BGT7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smndc1Q8BGT7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Smndc1Q8BGT7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smndc1Q8BGT7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smndc1Q8BGT7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smndc1Q8BGT7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smndc1Q8BGT7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smndc1Q8BGT7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smndc1Q8BGT7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smndc1Q8BGT7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smndc1Q8BGT7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smndc1Q8BGT7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smndc1Q8BGT7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smndc1Q8BGT7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smndc1Q8BGT7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.74■□□□□ 0.75
Smndc1Q8BGT7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smndc1Q8BGT7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smndc1Q8BGT7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smndc1Q8BGT7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.74■□□□□ 0.75
Smndc1Q8BGT7 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smndc1Q8BGT7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smndc1Q8BGT7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smndc1Q8BGT7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smndc1Q8BGT7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Smndc1Q8BGT7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smndc1Q8BGT7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smndc1Q8BGT7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.73■□□□□ 0.75
Smndc1Q8BGT7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smndc1Q8BGT7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smndc1Q8BGT7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smndc1Q8BGT7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smndc1Q8BGT7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smndc1Q8BGT7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smndc1Q8BGT7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms