Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vrk1Q80X41 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.71■□□□□ 0.75
Vrk1Q80X41 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vrk1Q80X41 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
Vrk1Q80X41 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vrk1Q80X41 Gm43137-201ENSMUST00000198052 594 ntBASIC19.71■□□□□ 0.75
Vrk1Q80X41 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.71■□□□□ 0.75
Vrk1Q80X41 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.71■□□□□ 0.75
Vrk1Q80X41 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vrk1Q80X41 Gm6139-201ENSMUST00000079261 882 ntBASIC19.71■□□□□ 0.75
Vrk1Q80X41 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vrk1Q80X41 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Vrk1Q80X41 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vrk1Q80X41 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vrk1Q80X41 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.7■□□□□ 0.74
Vrk1Q80X41 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vrk1Q80X41 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
Vrk1Q80X41 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Vrk1Q80X41 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Vrk1Q80X41 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vrk1Q80X41 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vrk1Q80X41 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vrk1Q80X41 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vrk1Q80X41 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.69■□□□□ 0.74
Vrk1Q80X41 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vrk1Q80X41 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vrk1Q80X41 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Vrk1Q80X41 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vrk1Q80X41 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.69■□□□□ 0.74
Vrk1Q80X41 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vrk1Q80X41 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.68■□□□□ 0.74
Vrk1Q80X41 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vrk1Q80X41 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.68■□□□□ 0.74
Vrk1Q80X41 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Vrk1Q80X41 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.68■□□□□ 0.74
Vrk1Q80X41 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vrk1Q80X41 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Vrk1Q80X41 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vrk1Q80X41 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.67■□□□□ 0.74
Vrk1Q80X41 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vrk1Q80X41 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Vrk1Q80X41 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Vrk1Q80X41 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vrk1Q80X41 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vrk1Q80X41 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vrk1Q80X41 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vrk1Q80X41 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Vrk1Q80X41 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Vrk1Q80X41 Mir7075-201ENSMUST00000184187 82 ntBASIC19.65■□□□□ 0.74
Vrk1Q80X41 Gm7143-201ENSMUST00000222811 859 ntBASIC19.65■□□□□ 0.74
Vrk1Q80X41 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vrk1Q80X41 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Vrk1Q80X41 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vrk1Q80X41 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vrk1Q80X41 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Vrk1Q80X41 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vrk1Q80X41 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.64■□□□□ 0.73
Vrk1Q80X41 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vrk1Q80X41 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vrk1Q80X41 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vrk1Q80X41 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vrk1Q80X41 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vrk1Q80X41 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vrk1Q80X41 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vrk1Q80X41 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.63■□□□□ 0.73
Vrk1Q80X41 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.63■□□□□ 0.73
Vrk1Q80X41 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Vrk1Q80X41 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vrk1Q80X41 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vrk1Q80X41 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Vrk1Q80X41 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vrk1Q80X41 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vrk1Q80X41 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vrk1Q80X41 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vrk1Q80X41 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Vrk1Q80X41 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vrk1Q80X41 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Vrk1Q80X41 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Vrk1Q80X41 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms