Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim62Q80V85 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim62Q80V85 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Trim62Q80V85 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim62Q80V85 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim62Q80V85 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Trim62Q80V85 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim62Q80V85 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim62Q80V85 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim62Q80V85 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim62Q80V85 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim62Q80V85 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim62Q80V85 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim62Q80V85 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim62Q80V85 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim62Q80V85 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim62Q80V85 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.43■■□□□ 1.02
Trim62Q80V85 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim62Q80V85 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim62Q80V85 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.42■■□□□ 1.02
Trim62Q80V85 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Trim62Q80V85 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.42■■□□□ 1.02
Trim62Q80V85 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim62Q80V85 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
Trim62Q80V85 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.42■■□□□ 1.02
Trim62Q80V85 Gm7143-201ENSMUST00000222811 859 ntBASIC21.42■■□□□ 1.02
Trim62Q80V85 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim62Q80V85 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim62Q80V85 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Trim62Q80V85 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim62Q80V85 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
Trim62Q80V85 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim62Q80V85 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Trim62Q80V85 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim62Q80V85 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim62Q80V85 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Trim62Q80V85 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Trim62Q80V85 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim62Q80V85 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim62Q80V85 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trim62Q80V85 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim62Q80V85 Gm9870-201ENSMUST00000063874 645 ntBASIC21.39■■□□□ 1.01
Trim62Q80V85 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim62Q80V85 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
Trim62Q80V85 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Trim62Q80V85 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim62Q80V85 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim62Q80V85 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Trim62Q80V85 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim62Q80V85 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Trim62Q80V85 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim62Q80V85 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trim62Q80V85 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trim62Q80V85 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim62Q80V85 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim62Q80V85 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.38■■□□□ 1.01
Trim62Q80V85 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim62Q80V85 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.37■■□□□ 1.01
Trim62Q80V85 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim62Q80V85 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trim62Q80V85 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.37■■□□□ 1.01
Trim62Q80V85 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim62Q80V85 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim62Q80V85 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim62Q80V85 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trim62Q80V85 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim62Q80V85 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim62Q80V85 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim62Q80V85 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim62Q80V85 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim62Q80V85 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim62Q80V85 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.36■■□□□ 1.01
Trim62Q80V85 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim62Q80V85 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim62Q80V85 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.36■■□□□ 1.01
Trim62Q80V85 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim62Q80V85 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Trim62Q80V85 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim62Q80V85 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Trim62Q80V85 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim62Q80V85 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim62Q80V85 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim62Q80V85 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.35■■□□□ 1.01
Trim62Q80V85 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim62Q80V85 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim62Q80V85 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim62Q80V85 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trim62Q80V85 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.34■■□□□ 1.01
Trim62Q80V85 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Trim62Q80V85 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trim62Q80V85 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim62Q80V85 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.34■■□□□ 1.01
Trim62Q80V85 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim62Q80V85 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim62Q80V85 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim62Q80V85 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim62Q80V85 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim62Q80V85 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim62Q80V85 Gm12922-201ENSMUST00000120626 809 ntBASIC21.33■■□□□ 1.01
Trim62Q80V85 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms