Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdh19Q80TF3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh19Q80TF3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdh19Q80TF3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.3■□□□□ 0.84
Pcdh19Q80TF3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdh19Q80TF3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh19Q80TF3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
Pcdh19Q80TF3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh19Q80TF3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdh19Q80TF3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh19Q80TF3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh19Q80TF3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh19Q80TF3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.29■□□□□ 0.84
Pcdh19Q80TF3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh19Q80TF3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh19Q80TF3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pcdh19Q80TF3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh19Q80TF3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh19Q80TF3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh19Q80TF3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.28■□□□□ 0.84
Pcdh19Q80TF3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdh19Q80TF3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdh19Q80TF3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Pcdh19Q80TF3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcdh19Q80TF3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh19Q80TF3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh19Q80TF3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh19Q80TF3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.27■□□□□ 0.84
Pcdh19Q80TF3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh19Q80TF3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh19Q80TF3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh19Q80TF3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdh19Q80TF3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdh19Q80TF3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh19Q80TF3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh19Q80TF3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh19Q80TF3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.26■□□□□ 0.83
Pcdh19Q80TF3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdh19Q80TF3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh19Q80TF3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh19Q80TF3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh19Q80TF3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh19Q80TF3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh19Q80TF3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh19Q80TF3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh19Q80TF3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh19Q80TF3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh19Q80TF3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh19Q80TF3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.25■□□□□ 0.83
Pcdh19Q80TF3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh19Q80TF3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh19Q80TF3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh19Q80TF3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh19Q80TF3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdh19Q80TF3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdh19Q80TF3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdh19Q80TF3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh19Q80TF3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh19Q80TF3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh19Q80TF3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 Gm7143-201ENSMUST00000222811 859 ntBASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.23■□□□□ 0.83
Pcdh19Q80TF3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh19Q80TF3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdh19Q80TF3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh19Q80TF3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh19Q80TF3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh19Q80TF3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh19Q80TF3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh19Q80TF3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh19Q80TF3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdh19Q80TF3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Pcdh19Q80TF3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh19Q80TF3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh19Q80TF3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh19Q80TF3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh19Q80TF3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh19Q80TF3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh19Q80TF3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh19Q80TF3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh19Q80TF3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh19Q80TF3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh19Q80TF3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Pcdh19Q80TF3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh19Q80TF3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.2■□□□□ 0.82
Pcdh19Q80TF3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh19Q80TF3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdh19Q80TF3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh19Q80TF3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh19Q80TF3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.19■□□□□ 0.82
Pcdh19Q80TF3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdh19Q80TF3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms