Protein–RNA interactions for Protein: Q7TT50

Cdc42bpb, Serine/threonine-protein kinase MRCK beta, mousemouse

Predictions only

Length 1,713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42bpbQ7TT50 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC30.68■■■□□ 2.5
Cdc42bpbQ7TT50 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Cdc42bpbQ7TT50 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Cdc42bpbQ7TT50 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
Cdc42bpbQ7TT50 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Cdc42bpbQ7TT50 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Cdc42bpbQ7TT50 Gm10129-202ENSMUST00000193100 1316 ntBASIC30.66■■■□□ 2.5
Cdc42bpbQ7TT50 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cdc42bpbQ7TT50 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
Cdc42bpbQ7TT50 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cdc42bpbQ7TT50 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cdc42bpbQ7TT50 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Cdc42bpbQ7TT50 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cdc42bpbQ7TT50 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cdc42bpbQ7TT50 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Cdc42bpbQ7TT50 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Cdc42bpbQ7TT50 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Cdc42bpbQ7TT50 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
Cdc42bpbQ7TT50 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Cdc42bpbQ7TT50 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
Cdc42bpbQ7TT50 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Cdc42bpbQ7TT50 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cdc42bpbQ7TT50 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
Cdc42bpbQ7TT50 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC30.63■■■□□ 2.49
Cdc42bpbQ7TT50 Gm37179-201ENSMUST00000194862 823 ntBASIC30.63■■■□□ 2.49
Cdc42bpbQ7TT50 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cdc42bpbQ7TT50 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cdc42bpbQ7TT50 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cdc42bpbQ7TT50 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cdc42bpbQ7TT50 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC30.62■■■□□ 2.49
Cdc42bpbQ7TT50 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC30.62■■■□□ 2.49
Cdc42bpbQ7TT50 Gm40848-201ENSMUST00000221998 324 ntBASIC30.62■■■□□ 2.49
Cdc42bpbQ7TT50 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Cdc42bpbQ7TT50 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Cdc42bpbQ7TT50 AC099934.2-201ENSMUST00000196389 70 ntBASIC30.61■■■□□ 2.49
Cdc42bpbQ7TT50 AC156953.1-201ENSMUST00000196953 70 ntBASIC30.61■■■□□ 2.49
Cdc42bpbQ7TT50 AC157822.2-201ENSMUST00000200291 70 ntBASIC30.61■■■□□ 2.49
Cdc42bpbQ7TT50 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC30.61■■■□□ 2.49
Cdc42bpbQ7TT50 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC30.61■■■□□ 2.49
Cdc42bpbQ7TT50 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cdc42bpbQ7TT50 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cdc42bpbQ7TT50 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC30.61■■■□□ 2.49
Cdc42bpbQ7TT50 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cdc42bpbQ7TT50 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Cdc42bpbQ7TT50 Gm27405-201ENSMUST00000184201 112 ntBASIC30.6■■■□□ 2.49
Cdc42bpbQ7TT50 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Cdc42bpbQ7TT50 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Cdc42bpbQ7TT50 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cdc42bpbQ7TT50 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cdc42bpbQ7TT50 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cdc42bpbQ7TT50 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cdc42bpbQ7TT50 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cdc42bpbQ7TT50 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Cdc42bpbQ7TT50 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Cdc42bpbQ7TT50 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC30.59■■■□□ 2.49
Cdc42bpbQ7TT50 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC30.59■■■□□ 2.49
Cdc42bpbQ7TT50 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Cdc42bpbQ7TT50 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
Cdc42bpbQ7TT50 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Cdc42bpbQ7TT50 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cdc42bpbQ7TT50 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cdc42bpbQ7TT50 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cdc42bpbQ7TT50 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cdc42bpbQ7TT50 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Cdc42bpbQ7TT50 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cdc42bpbQ7TT50 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cdc42bpbQ7TT50 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Cdc42bpbQ7TT50 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cdc42bpbQ7TT50 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cdc42bpbQ7TT50 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Cdc42bpbQ7TT50 AC166356.1-201ENSMUST00000228236 1426 ntBASIC30.55■■■□□ 2.48
Cdc42bpbQ7TT50 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC30.55■■■□□ 2.48
Cdc42bpbQ7TT50 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cdc42bpbQ7TT50 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cdc42bpbQ7TT50 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC30.54■■■□□ 2.48
Cdc42bpbQ7TT50 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cdc42bpbQ7TT50 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cdc42bpbQ7TT50 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Cdc42bpbQ7TT50 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Cdc42bpbQ7TT50 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cdc42bpbQ7TT50 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Cdc42bpbQ7TT50 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cdc42bpbQ7TT50 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cdc42bpbQ7TT50 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cdc42bpbQ7TT50 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cdc42bpbQ7TT50 Gm43060-201ENSMUST00000200621 289 ntBASIC30.52■■■□□ 2.48
Cdc42bpbQ7TT50 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cdc42bpbQ7TT50 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Cdc42bpbQ7TT50 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Cdc42bpbQ7TT50 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms