Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim46Q7TNM2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim46Q7TNM2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim46Q7TNM2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim46Q7TNM2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim46Q7TNM2 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.4■□□□□ 0.7
Trim46Q7TNM2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim46Q7TNM2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim46Q7TNM2 Gm10399-202ENSMUST00000202768 748 ntBASIC19.39■□□□□ 0.69
Trim46Q7TNM2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim46Q7TNM2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim46Q7TNM2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim46Q7TNM2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim46Q7TNM2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim46Q7TNM2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim46Q7TNM2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim46Q7TNM2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim46Q7TNM2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim46Q7TNM2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim46Q7TNM2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim46Q7TNM2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim46Q7TNM2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim46Q7TNM2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim46Q7TNM2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim46Q7TNM2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim46Q7TNM2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim46Q7TNM2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim46Q7TNM2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim46Q7TNM2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim46Q7TNM2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim46Q7TNM2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim46Q7TNM2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim46Q7TNM2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim46Q7TNM2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim46Q7TNM2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim46Q7TNM2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim46Q7TNM2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim46Q7TNM2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim46Q7TNM2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim46Q7TNM2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim46Q7TNM2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim46Q7TNM2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim46Q7TNM2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim46Q7TNM2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim46Q7TNM2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Trim46Q7TNM2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim46Q7TNM2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.34■□□□□ 0.69
Trim46Q7TNM2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim46Q7TNM2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.34■□□□□ 0.69
Trim46Q7TNM2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trim46Q7TNM2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim46Q7TNM2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim46Q7TNM2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.69
Trim46Q7TNM2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.33■□□□□ 0.69
Trim46Q7TNM2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.33■□□□□ 0.68
Trim46Q7TNM2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim46Q7TNM2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim46Q7TNM2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim46Q7TNM2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim46Q7TNM2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim46Q7TNM2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim46Q7TNM2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.33■□□□□ 0.68
Trim46Q7TNM2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim46Q7TNM2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim46Q7TNM2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Trim46Q7TNM2 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.32■□□□□ 0.68
Trim46Q7TNM2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim46Q7TNM2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim46Q7TNM2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim46Q7TNM2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim46Q7TNM2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim46Q7TNM2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim46Q7TNM2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim46Q7TNM2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim46Q7TNM2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim46Q7TNM2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim46Q7TNM2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim46Q7TNM2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim46Q7TNM2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Trim46Q7TNM2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim46Q7TNM2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim46Q7TNM2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trim46Q7TNM2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim46Q7TNM2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim46Q7TNM2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim46Q7TNM2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim46Q7TNM2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms