Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vma21Q78T54 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vma21Q78T54 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vma21Q78T54 Gm11175-201ENSMUST00000116172 543 ntBASIC16.78■□□□□ 0.28
Vma21Q78T54 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.78■□□□□ 0.28
Vma21Q78T54 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vma21Q78T54 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vma21Q78T54 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.78■□□□□ 0.28
Vma21Q78T54 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vma21Q78T54 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vma21Q78T54 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vma21Q78T54 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vma21Q78T54 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vma21Q78T54 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vma21Q78T54 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.77■□□□□ 0.27
Vma21Q78T54 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Vma21Q78T54 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vma21Q78T54 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vma21Q78T54 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vma21Q78T54 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.76■□□□□ 0.27
Vma21Q78T54 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vma21Q78T54 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.75■□□□□ 0.27
Vma21Q78T54 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vma21Q78T54 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Vma21Q78T54 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.75■□□□□ 0.27
Vma21Q78T54 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.75■□□□□ 0.27
Vma21Q78T54 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.75■□□□□ 0.27
Vma21Q78T54 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.75■□□□□ 0.27
Vma21Q78T54 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vma21Q78T54 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vma21Q78T54 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vma21Q78T54 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vma21Q78T54 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Vma21Q78T54 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Vma21Q78T54 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.74■□□□□ 0.27
Vma21Q78T54 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Vma21Q78T54 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Vma21Q78T54 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Vma21Q78T54 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vma21Q78T54 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vma21Q78T54 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Vma21Q78T54 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Vma21Q78T54 Gm10420-201ENSMUST00000121713 882 ntBASIC16.73■□□□□ 0.27
Vma21Q78T54 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.73■□□□□ 0.27
Vma21Q78T54 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vma21Q78T54 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vma21Q78T54 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vma21Q78T54 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Vma21Q78T54 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Vma21Q78T54 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vma21Q78T54 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vma21Q78T54 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.72■□□□□ 0.27
Vma21Q78T54 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vma21Q78T54 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Vma21Q78T54 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Vma21Q78T54 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vma21Q78T54 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vma21Q78T54 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vma21Q78T54 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Vma21Q78T54 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vma21Q78T54 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Vma21Q78T54 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vma21Q78T54 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.71■□□□□ 0.27
Vma21Q78T54 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vma21Q78T54 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Vma21Q78T54 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vma21Q78T54 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vma21Q78T54 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vma21Q78T54 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vma21Q78T54 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vma21Q78T54 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vma21Q78T54 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.7■□□□□ 0.26
Vma21Q78T54 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vma21Q78T54 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vma21Q78T54 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vma21Q78T54 Mir6538-201ENSMUST00000183713 110 ntBASIC16.7■□□□□ 0.26
Vma21Q78T54 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Vma21Q78T54 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vma21Q78T54 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vma21Q78T54 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vma21Q78T54 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vma21Q78T54 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.69■□□□□ 0.26
Vma21Q78T54 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.69■□□□□ 0.26
Vma21Q78T54 Gm12366-201ENSMUST00000121722 873 ntBASIC16.69■□□□□ 0.26
Vma21Q78T54 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.69■□□□□ 0.26
Vma21Q78T54 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vma21Q78T54 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vma21Q78T54 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms