Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
Timd4Q6U7R4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Timd4Q6U7R4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Timd4Q6U7R4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Timd4Q6U7R4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Timd4Q6U7R4 Gm7417-201ENSMUST00000192950 473 ntBASIC19.26■□□□□ 0.67
Timd4Q6U7R4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.26■□□□□ 0.67
Timd4Q6U7R4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Timd4Q6U7R4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Timd4Q6U7R4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Timd4Q6U7R4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Timd4Q6U7R4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.25■□□□□ 0.67
Timd4Q6U7R4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.25■□□□□ 0.67
Timd4Q6U7R4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Timd4Q6U7R4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Timd4Q6U7R4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Timd4Q6U7R4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Timd4Q6U7R4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Timd4Q6U7R4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.25■□□□□ 0.67
Timd4Q6U7R4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Timd4Q6U7R4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Timd4Q6U7R4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Timd4Q6U7R4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Timd4Q6U7R4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Timd4Q6U7R4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Timd4Q6U7R4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Timd4Q6U7R4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Timd4Q6U7R4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Timd4Q6U7R4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Timd4Q6U7R4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Timd4Q6U7R4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Timd4Q6U7R4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.22■□□□□ 0.67
Timd4Q6U7R4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timd4Q6U7R4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timd4Q6U7R4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Timd4Q6U7R4 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.21■□□□□ 0.67
Timd4Q6U7R4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timd4Q6U7R4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Timd4Q6U7R4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Timd4Q6U7R4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timd4Q6U7R4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.2■□□□□ 0.66
Timd4Q6U7R4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.2■□□□□ 0.66
Timd4Q6U7R4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timd4Q6U7R4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Timd4Q6U7R4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timd4Q6U7R4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timd4Q6U7R4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Timd4Q6U7R4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.19■□□□□ 0.66
Timd4Q6U7R4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Timd4Q6U7R4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Timd4Q6U7R4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.18■□□□□ 0.66
Timd4Q6U7R4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.18■□□□□ 0.66
Timd4Q6U7R4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.18■□□□□ 0.66
Timd4Q6U7R4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Timd4Q6U7R4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Timd4Q6U7R4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Timd4Q6U7R4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timd4Q6U7R4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timd4Q6U7R4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timd4Q6U7R4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.17■□□□□ 0.66
Timd4Q6U7R4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timd4Q6U7R4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timd4Q6U7R4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Timd4Q6U7R4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Timd4Q6U7R4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Timd4Q6U7R4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Timd4Q6U7R4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Timd4Q6U7R4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Timd4Q6U7R4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Timd4Q6U7R4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Timd4Q6U7R4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Timd4Q6U7R4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Timd4Q6U7R4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Timd4Q6U7R4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Timd4Q6U7R4 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.14■□□□□ 0.65
Timd4Q6U7R4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Timd4Q6U7R4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms