Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rif1Q6PR54 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.67■□□□□ 0.42
Rif1Q6PR54 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rif1Q6PR54 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rif1Q6PR54 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.66■□□□□ 0.42
Rif1Q6PR54 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.66■□□□□ 0.42
Rif1Q6PR54 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rif1Q6PR54 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rif1Q6PR54 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rif1Q6PR54 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.66■□□□□ 0.42
Rif1Q6PR54 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rif1Q6PR54 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rif1Q6PR54 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.65■□□□□ 0.42
Rif1Q6PR54 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.65■□□□□ 0.42
Rif1Q6PR54 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rif1Q6PR54 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rif1Q6PR54 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.64■□□□□ 0.42
Rif1Q6PR54 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rif1Q6PR54 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.64■□□□□ 0.42
Rif1Q6PR54 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.64■□□□□ 0.41
Rif1Q6PR54 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.64■□□□□ 0.41
Rif1Q6PR54 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.64■□□□□ 0.41
Rif1Q6PR54 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rif1Q6PR54 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rif1Q6PR54 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Rif1Q6PR54 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Rif1Q6PR54 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.63■□□□□ 0.41
Rif1Q6PR54 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.63■□□□□ 0.41
Rif1Q6PR54 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rif1Q6PR54 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rif1Q6PR54 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Rif1Q6PR54 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.63■□□□□ 0.41
Rif1Q6PR54 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rif1Q6PR54 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rif1Q6PR54 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rif1Q6PR54 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rif1Q6PR54 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rif1Q6PR54 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.62■□□□□ 0.41
Rif1Q6PR54 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rif1Q6PR54 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.62■□□□□ 0.41
Rif1Q6PR54 Gm18101-201ENSMUST00000215769 548 ntBASIC17.62■□□□□ 0.41
Rif1Q6PR54 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rif1Q6PR54 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.62■□□□□ 0.41
Rif1Q6PR54 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rif1Q6PR54 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rif1Q6PR54 Gm10812-201ENSMUST00000099864 546 ntBASIC17.62■□□□□ 0.41
Rif1Q6PR54 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rif1Q6PR54 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Rif1Q6PR54 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rif1Q6PR54 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rif1Q6PR54 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rif1Q6PR54 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.61■□□□□ 0.41
Rif1Q6PR54 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rif1Q6PR54 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rif1Q6PR54 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rif1Q6PR54 Gm13168-201ENSMUST00000121771 632 ntBASIC17.61■□□□□ 0.41
Rif1Q6PR54 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rif1Q6PR54 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Gm715-201ENSMUST00000117865 831 ntBASIC17.6■□□□□ 0.41
Rif1Q6PR54 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
Rif1Q6PR54 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rif1Q6PR54 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rif1Q6PR54 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rif1Q6PR54 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rif1Q6PR54 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rif1Q6PR54 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rif1Q6PR54 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rif1Q6PR54 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rif1Q6PR54 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rif1Q6PR54 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rif1Q6PR54 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rif1Q6PR54 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rif1Q6PR54 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rif1Q6PR54 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rif1Q6PR54 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rif1Q6PR54 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.58■□□□□ 0.4
Rif1Q6PR54 Gm37856-201ENSMUST00000191634 999 ntBASIC17.58■□□□□ 0.4
Rif1Q6PR54 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rif1Q6PR54 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rif1Q6PR54 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Rif1Q6PR54 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rif1Q6PR54 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.57■□□□□ 0.4
Rif1Q6PR54 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rif1Q6PR54 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rif1Q6PR54 Gm20049-201ENSMUST00000219950 730 ntBASIC17.57■□□□□ 0.4
Rif1Q6PR54 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.57■□□□□ 0.4
Rif1Q6PR54 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.57■□□□□ 0.4
Rif1Q6PR54 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rif1Q6PR54 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rif1Q6PR54 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rif1Q6PR54 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms