Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rundc3bQ6PDC0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.41■□□□□ 0.7
Rundc3bQ6PDC0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rundc3bQ6PDC0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Rundc3bQ6PDC0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rundc3bQ6PDC0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rundc3bQ6PDC0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rundc3bQ6PDC0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rundc3bQ6PDC0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rundc3bQ6PDC0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rundc3bQ6PDC0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rundc3bQ6PDC0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rundc3bQ6PDC0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rundc3bQ6PDC0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rundc3bQ6PDC0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rundc3bQ6PDC0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rundc3bQ6PDC0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rundc3bQ6PDC0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rundc3bQ6PDC0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rundc3bQ6PDC0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rundc3bQ6PDC0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3bQ6PDC0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3bQ6PDC0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Rundc3bQ6PDC0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3bQ6PDC0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.38■□□□□ 0.69
Rundc3bQ6PDC0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3bQ6PDC0 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.38■□□□□ 0.69
Rundc3bQ6PDC0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3bQ6PDC0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3bQ6PDC0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Gm45364-201ENSMUST00000210883 159 ntBASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3bQ6PDC0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3bQ6PDC0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3bQ6PDC0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rundc3bQ6PDC0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3bQ6PDC0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3bQ6PDC0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3bQ6PDC0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3bQ6PDC0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3bQ6PDC0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3bQ6PDC0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Rundc3bQ6PDC0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3bQ6PDC0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.33■□□□□ 0.68
Rundc3bQ6PDC0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rundc3bQ6PDC0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rundc3bQ6PDC0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3bQ6PDC0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms