Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr1Q64729 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.77■□□□□ 0.28
Tgfbr1Q64729 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr1Q64729 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr1Q64729 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.77■□□□□ 0.28
Tgfbr1Q64729 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.77■□□□□ 0.28
Tgfbr1Q64729 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.77■□□□□ 0.28
Tgfbr1Q64729 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr1Q64729 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.77■□□□□ 0.28
Tgfbr1Q64729 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Tgfbr1Q64729 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tgfbr1Q64729 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Tgfbr1Q64729 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Tgfbr1Q64729 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tgfbr1Q64729 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.77■□□□□ 0.27
Tgfbr1Q64729 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr1Q64729 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr1Q64729 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Tgfbr1Q64729 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr1Q64729 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.76■□□□□ 0.27
Tgfbr1Q64729 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr1Q64729 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tgfbr1Q64729 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tgfbr1Q64729 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tgfbr1Q64729 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr1Q64729 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Tgfbr1Q64729 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Tgfbr1Q64729 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.73■□□□□ 0.27
Tgfbr1Q64729 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr1Q64729 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tgfbr1Q64729 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tgfbr1Q64729 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Tgfbr1Q64729 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tgfbr1Q64729 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.72■□□□□ 0.27
Tgfbr1Q64729 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr1Q64729 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.72■□□□□ 0.27
Tgfbr1Q64729 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr1Q64729 Gm14523-201ENSMUST00000117260 558 ntBASIC16.72■□□□□ 0.27
Tgfbr1Q64729 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.72■□□□□ 0.27
Tgfbr1Q64729 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr1Q64729 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr1Q64729 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr1Q64729 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tgfbr1Q64729 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.71■□□□□ 0.27
Tgfbr1Q64729 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Tgfbr1Q64729 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tgfbr1Q64729 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tgfbr1Q64729 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Gm11175-201ENSMUST00000116172 543 ntBASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tgfbr1Q64729 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Gm7332-201ENSMUST00000118351 454 ntBASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tgfbr1Q64729 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms